Tardiphaga sp. vice154: FIU28_20390
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Entry
FIU28_20390 CDS
T11090
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv02020
Two-component system
tarv02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FIU28_20390
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FIU28_20390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tarv02035
]
FIU28_20390
Bacterial motility proteins [BR:
tarv02035
]
Flagellar system
Chemotaxis proteins
MCPs
FIU28_20390
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QDM23234
LinkDB
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Position
complement(4358019..4359698)
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AA seq
559 aa
AA seq
DB search
MRLNNLRITSKLVILVAVTMIGLCAAGILAAYLVKSEMLAARTEQLKSIVELGTNVAANV
QKDVAAGKISKEAATAELVRRIEPMTYDNGNYLFIYTMDGVVVHLPGFKAGSDRLNTLVN
GVPVTREFRDGVAAKGWALLTYEFAKPNAQVLSRKMGYAAALPGWNMFIATGAYLDDLDE
HLKPIIWALGLAMVGIAAVAGLIAWLIGRSITGPLRQLGTRMGTLANGAIDDAIPCVERG
DEVGAMAKTVQVFKDNALRIRGLDQDAVAAQGRAAADRHAAMESIADEFERSVNGIVRSV
STAASGMQVTARSMTATASDASARAATVGSASQRSSDDVGTVASAAEELSASVNEVLRQV
AQSTEVASRAVSDAERTNATVQLLSRGAEKIGEVVQLIHNIASQTNLLALNATIEAARAG
ESGRGFAVVASEVKALASQTAKATEEISAQVSAMQASTSEAVASITGITGTIGEMSEITS
RISGAVEEQGKATREIAQSIQSVAAGASEISHNIGGVTASAEATGAAASQVLSSARELDS
QSGMLRAAVSDFLSKVRAA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgagattgaacaatcttcgcattacgtccaagctcgtcattctggtcgccgtcaccatg
atcggtttgtgcgccgccggtattctggcggcctacctggtcaagagcgagatgctcgcg
gcgcgcaccgagcagttgaagtcgatcgtcgaactcggcaccaacgtcgcggccaacgtg
cagaaggacgtcgcggccggcaagatcagcaaggaagctgccaccgccgaactggtccgc
cgcatcgagccgatgacctacgacaatggcaactacctgtttatctacacgatggacggc
gtcgtcgtgcatctgccaggcttcaaggcgggatccgaccggctgaacaccttggtcaat
ggcgtgcccgtgacccgcgaatttcgtgacggcgtcgccgccaagggctgggcgcttttg
acctatgagttcgccaagcccaatgctcaggtgctgtcgcgcaagatgggctatgcggca
gcgcttcccggctggaacatgttcatcgccaccggcgcctatctcgacgacctcgacgag
cacctcaagccgatcatctgggcgcttggcctcgcgatggtgggcatcgccgccgtcgcc
ggcctgatcgcctggctgatcggccgcagcatcaccgggccgctccgccagctcggcacg
cggatggggacgctggccaatggcgcgatcgacgatgcaattccctgtgtcgagcgcggt
gacgaggtcggcgccatggccaagaccgttcaggtgttcaaggacaacgcgctgcggatt
cgcgggctggatcaggatgcggtcgcagcgcagggccgcgccgcagccgatcgtcacgcc
gcgatggagagcatcgccgacgagttcgagcgcagcgtcaacggcatcgtccgttcggtc
tcgaccgcggcgtccggtatgcaggtcaccgctcgatcgatgacggcaaccgcgtctgat
gccagtgcacgcgccgccacggtgggctctgcgtcgcaacgatcctcggacgatgtgggg
acggtcgcgtcggcggcggaggaattgtcggcgtcggtcaacgaggtgctgcgccaggtc
gcgcaatcgaccgaagtggccagccgcgcggtgagcgatgccgagcgcaccaatgccacc
gtgcagttgctgtcgcgcggcgccgagaagatcggcgaggtggtgcaactgatccataac
atcgcatcgcagaccaacctgctggcgctcaacgccaccatcgaggcggcgcgcgccggc
gaatccggccgtggcttcgccgtcgtggccagcgaggtgaaggcgctggcgagccagacc
gccaaggcgactgaagaaatctccgcccaggtctcggccatgcaggcctcgaccagcgag
gcggtggcgtcgatcaccggcatcaccggcacgatcggggagatgagcgagatcaccagc
cgcatttccggcgccgtcgaggaacagggcaaggcgacgcgcgagattgcgcagagcatc
cagtcggtcgcagccggcgccagcgagatcagccacaatatcggtggcgtcaccgcctct
gccgaggccaccggtgcggcggcgtcgcaggtgctgtccagcgcccgcgaattggacagt
cagtccggcatgctgcgtgcagcggtcagcgacttcctcagcaaggtccgggcggcgtga
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