Tardiphaga sp. vice154: FIU28_20950
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Entry
FIU28_20950 CDS
T11090
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
tarv Tardiphaga sp. vice154
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tarv03009
]
FIU28_20950
Enzymes [BR:
tarv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FIU28_20950
Ribosome biogenesis [BR:
tarv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FIU28_20950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QDM23333
LinkDB
All DBs
Position
complement(4467397..4469712)
Genome browser
AA seq
771 aa
AA seq
DB search
MPRDNDRNNGPSRGRPPGKSGGGASKGRSGAARGPEKKFAKRDGTYAPKPHDAGAAGERK
TYGAKPYSGPGKPYAGKREGAAPRRDDDRAPRRDYGDAPRPARSFGGDRPERSGGDKRPY
QSRDGGGEKRPYTPRDGGGEKRPYSPRPAGGDKRPYQSRDGGGEKRPYTPRDGGGEKRPY
TPREGGGEKRPYSPRGDRPTFNRDDRAPRSDARPAGRSDDRKFGEKRPYTPRDGGGEKRP
YQSRDGGDKRPYTPRDGGDRPRPSGDRPYSARPSRDNDRPRSDRPQGDRPFSGGSKFGGD
KKFSRGAPDRGGPRKTFGDRPDRGADRGESKPWQKREEGDRNARPSRDGARQYERPKFER
TEFPRVHEERPRFERASEARPKFDRPRERPSNDFHEHPRNNSGLERPRRDNEDDSRIFAK
RPAFGGRGDYRERKPEERRPPRPPAPKKDGERVAKVVSRAGLCSRRDAEDWVTQGRVAVN
GRIINSPALDVTTRDVITVDGKPLPAPERTRLFMYHKPRGLMTTHADPEGRPTVFDHLPE
HLPRLISIGRLDFNTEGLLLLTNDGGLARTLELPDTGWLRRYRVRAHGEVTQSQLDQLKH
GVEVDGVKYGSIDATLERDQGANVWLVFAIREGKNREVRNVLAHLGLEVNRLIRISYGPF
QLGELEEGGVEEVKTRVLREQLGEKIAEASGADFARQIPSKGDPSDDPIIVKKPEFKRST
TEDRKGRRVLVQRTGSEESRTRNEEEASGYGPPKRPKRGYHGKRDITPRKD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgacaacgatcgaaataacggcccctcgcgcggccgtccgcccggcaagtcc
ggcggtggcgccagcaagggccgctccggcgcggcgcgcggccccgagaagaaattcgcc
aagcgcgacggtacctacgcgccgaagccgcacgatgccggtgcagccggcgagcgcaag
acctatggcgccaaaccctattccggcccgggcaagccctatgccggcaagcgcgagggc
gcagccccgcgccgcgacgacgaccgcgccccgcgccgcgattatggcgacgcgccgcgt
cccgcccgcagcttcggcggcgatcgccccgagcgcagcggcggcgacaagcgcccgtac
cagtcccgcgacggtggcggcgagaagcgcccctatacgccgcgcgacggcggtggcgag
aagcggccgtattcgccgcgccctgcgggtggcgacaagcgtccgtaccagtcccgtgac
ggtggcggtgagaagcgcccctacacgccgcgtgacggcggtggcgaaaagcgcccctac
accccgcgcgaaggcggcggcgagaagcgtccctatagcccgcgtggcgaccgtcccact
ttcaaccgcgatgaccgtgcgcctcgcagtgatgcccggccggccggccgttccgacgac
aggaagttcggcgagaagcgtccgtacaccccgcgcgacggtggtggcgagaagcgcccg
taccagtcccgcgatggcggcgacaagcgcccctatacgccgcgcgacggcggcgaccgg
ccgcgcccttctggcgaccgtccttacagcgcgcgcccgtcgcgcgacaatgatcgtccg
cgttcggaccgcccgcagggcgatcgtcccttcagcggcggctccaaattcggtggcgac
aagaagttttcccgtggcgcgccggatcgcggcggtccgcgcaagacgttcggcgaccgg
cccgatcgcggcgcggatcgcggcgaatccaagccgtggcagaagcgcgaggagggtgat
cgcaatgcgcgtccgtcgcgcgacggcgcccgtcaatacgagcgtccgaagttcgagcgc
accgagtttccccgcgtgcatgaagagcgtccgcgcttcgagcgcgccagcgaggcccgt
ccgaaattcgaccggccgcgcgagcgcccgagcaacgacttccacgaacatccgcgcaac
aattccggcctcgagcggccgcgtcgcgacaacgaggatgacagccgcatcttcgccaag
cgccccgctttcggcggccgcggcgactatcgcgagcgcaagccggaagaacgccgtccg
ccgcgcccgccggccccgaagaaggacggcgagcgcgtcgcgaaagtcgtgtcgcgcgct
ggcctgtgctcgcgccgcgatgccgaggactgggtcacgcagggccgcgtcgcggtcaac
ggccgtatcatcaattcgccggcgctcgacgtcaccacccgcgacgtcatcaccgtcgat
ggcaagccgttgcccgcacccgagcgcacgcggctgttcatgtatcacaagccgcgcggc
ctgatgaccacgcatgccgatcccgagggacggccgaccgtgttcgaccatctgcccgag
catctgccgcggctgatctcgatcggccggctggatttcaacaccgaaggcctgctgctt
ctcaccaatgatggcggcctcgcgcgcacgctcgaactacccgacaccggctggctgcgc
cgctaccgcgtccgcgcgcatggcgaagtcacgcagtcgcaactcgatcagctcaagcac
ggcgtcgaggtcgacggcgtcaagtacggctcgatcgatgcgacgttggaacgcgaccag
ggcgccaatgtctggctggtgttcgcaatccgcgaaggcaagaaccgcgaagtccgtaac
gtgctggcgcatctcggcctcgaagtgaaccgcctgatccggatttcctacggcccgttc
cagctcggcgagctggaagaaggcggcgtcgaggaagttaagacccgcgtgctgcgcgag
cagctcggcgagaagatcgcggaagcgtcgggtgcggattttgcgcggcagattcccagc
aagggcgatccgtcggacgatccgatcatcgtcaagaagccggagttcaaacgctcgacc
acggaggaccgcaagggccgccgtgtgctggtgcagcgcaccggctcggaagaatcgcgt
actcgcaatgaggaagaagcgtcaggctacggcccgccgaaacgcccgaagcgcggctat
cacggcaagcgcgacatcacgccccgaaaggactga
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