Tardiphaga sp. vice154: FIU28_21100
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Entry
FIU28_21100 CDS
T11090
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIU28_21100 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tarv03019
]
FIU28_21100 (groL)
03110 Chaperones and folding catalysts [BR:
tarv03110
]
FIU28_21100 (groL)
03029 Mitochondrial biogenesis [BR:
tarv03029
]
FIU28_21100 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tarv04147
]
FIU28_21100 (groL)
Enzymes [BR:
tarv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FIU28_21100 (groL)
Messenger RNA biogenesis [BR:
tarv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FIU28_21100 (groL)
Chaperones and folding catalysts [BR:
tarv03110
]
Heat shock proteins
HSP60 / Chaperonin
FIU28_21100 (groL)
Mitochondrial biogenesis [BR:
tarv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FIU28_21100 (groL)
Exosome [BR:
tarv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FIU28_21100 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FIU28_21100 (groL)
Exosomal proteins of breast cancer cells
FIU28_21100 (groL)
Exosomal proteins of colorectal cancer cells
FIU28_21100 (groL)
Exosomal proteins of bladder cancer cells
FIU28_21100 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QDM23362
LinkDB
All DBs
Position
4495369..4497024
Genome browser
AA seq
551 aa
AA seq
DB search
MAAKDVKFSGDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMLREVASKTNDTAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGI
DIAVAAVIKDITKRAKPVASTAEVAQVGTISANGDAAIGKMIAQAMQKVGNEGVITVEEN
KSLETEVDIVEGMKFDRGYLSPYFVTNPEKMTAELEDVYVLLYEKKVTGLQTMLPVLEAV
VQSGKPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDLAILTGGQL
ISEELGMKLESTTLAMLGRAKKVVIDKENTTIVGGAGKKPAIESRVNQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVDDALNATRAAVQEGIVPGGGVALL
RAKKAVGRLTSENSDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGRIMENKSETFGFD
AQTEEYVDMVAKGIIDPAKVVRTALQDAASVAGLLVTTEAMVAELPREAAPAMPGGGGGM
GGMGGMGGMGF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaaggacgttaaattttccggagacgcgcgcgatcgcatgctgcgcggcgtc
gacattctcgccaatgccgtcaaggtcacgctcggtcccaagggccgcaatgtcgtgatc
gaaaagagcttcggcgcgccccgcatcaccaaggacggcgtcaccgtcgccaaggaaatc
gagcttgaggacaagttcgagaacatgggcgcgcagatgctgcgcgaggtcgcttccaag
accaacgacaccgccggcgacggcaccaccaccgccaccgtgctggcccaggccatcgtg
cgtgagggcgccaagtcggtcgctgccggcatgaacccgatggacctcaagcgcggcatc
gacatcgcggtcgccgccgtgatcaaggacatcaccaagcgcgccaagccggtcgcctcg
accgccgaagtcgcccaggtcggcaccatctccgccaatggcgacgccgcgatcggcaag
atgatcgcccaggcgatgcagaaggttggcaatgaaggcgttatcaccgtcgaagagaac
aagtcgctcgagaccgaagtcgacatcgtcgaaggcatgaagttcgaccgcggctatctg
tcgccctacttcgtgaccaaccccgagaagatgaccgccgagctcgaggacgtctacgtc
ctgttgtacgagaagaaggtgacgggcctgcaaaccatgctgccggtgctcgaggccgtg
gtgcagtcgggcaagccgctcctgatcatcgccgaggacgtcgaaggcgaggcgctggcc
acgctggtcgttaaccgcctgcgcggcggcctcaaggttgccgccgtcaaggcgccgggc
ttcggcgatcgccgcaaggcgatgctggaagatctggcgatactgaccggcgggcaattg
atctcggaagagctcggcatgaagctggaaagcaccacgctggccatgctcggccgcgcc
aagaaggtggtgatcgacaaggaaaacaccaccatcgtgggcggcgccggcaagaagccc
gcgatcgaatcccgggtcaaccagataaaggcgcagatcgaggaaaccacctcggactac
gaccgcgagaagctgcaggagcggctcgccaagctcgccggcggcgtcgcggtgatccgc
gtcggtggcgccaccgagatcgaagtgaaagagaagaaggaccgcgtcgatgacgcgctc
aacgcgacgcgggcggccgtgcaggaaggcatcgtgccgggcggcggcgtggcgctgctg
cgcgccaagaaggcggtgggccgtctcaccagcgagaactccgacgtccaggccggcatc
aacatcgtgctgaaggcgctggaagccccgatccgccagatcgccgagaatgccggcgtg
gaaggctcgatcgtggtcggcaggatcatggagaacaagtccgagacgttcggcttcgac
gcccagaccgaagaatatgtcgacatggtcgccaagggcatcatcgatcccgccaaggtg
gttcgcaccgccctacaggacgcggcctccgtggccggcctgctggtgacgaccgaagcc
atggtcgccgaactgccgcgcgaagcagccccggcgatgcccggcggcggcggcggcatg
gggggcatgggcggaatgggaggcatgggcttctga
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