Tardiphaga sp. vice154: FIU28_23660
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Entry
FIU28_23660 CDS
T11090
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIU28_23660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tarv03019
]
FIU28_23660
03110 Chaperones and folding catalysts [BR:
tarv03110
]
FIU28_23660
03029 Mitochondrial biogenesis [BR:
tarv03029
]
FIU28_23660
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tarv04147
]
FIU28_23660
Enzymes [BR:
tarv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FIU28_23660
Messenger RNA biogenesis [BR:
tarv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FIU28_23660
Chaperones and folding catalysts [BR:
tarv03110
]
Heat shock proteins
HSP60 / Chaperonin
FIU28_23660
Mitochondrial biogenesis [BR:
tarv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FIU28_23660
Exosome [BR:
tarv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FIU28_23660
Exosomal proteins of other body fluids (saliva and urine)
FIU28_23660
Exosomal proteins of breast cancer cells
FIU28_23660
Exosomal proteins of colorectal cancer cells
FIU28_23660
Exosomal proteins of bladder cancer cells
FIU28_23660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QDM23819
LinkDB
All DBs
Position
complement(5037767..5039398)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKMMLHDSQAREALARGVAKLAKAVSGTLGPKGMNAVMDRPIGTPIVSRDGVSIAAEIE
LECPFENMGAQVLREVSKQTNEVAGDGTTTATVLANYLVQDGLALLAAGANPVELVEGLE
LAVDETISALKRSAKSVDGAKGIRAIATIAANDVRLGAMVAEAFERAGNHGIVAVEFGST
VETTLEVVEGMAFERGYLSHHMVTDVERMQVVLDEPYILMTDHKILAIDELKGVFALIEK
SGRPLLIIAEEVAPPVIMMLLSRREKNNFKVAAIHPPEYGHWRKAMLEDIAVATGGRVIS
KDLGGTVERASLEDLGSARQVRISSSKTLITAGHGKPKMVEARREQVSRQYEAAPENIER
DKFLERLAKLSGGTAMILAGGATPVEQKRRAQLIEDSINATRAAIEEGVVPGGGVALIRV
AAELDGLINRLEGSARQGAELVQRSLSQPLACIVANCGRGDSKAAVEKVAKASNGYGFDA
RTGTTVDMIKSGIIDPVKVSYCAMRNAGSVAALILTTQTLIAKRPDNYDPTSGPAIGGGA
ELL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatgatgctccatgattcccaggcgcgcgaagcactcgcacgcggcgttgca
aagctggcgaaggcggtcagcggcacgctcggcccgaagggcatgaatgcggtgatggac
cggccgatcggcacgccgatcgtgtcgcgcgacggcgtcagcatcgccgccgagatcgag
ctggagtgcccgttcgagaatatgggcgcccaggtgctgcgcgaagtctcgaagcagacc
aacgaggttgcgggcgacggcaccacgaccgcgaccgtgctggcgaactacctcgtacag
gacggtttggcgctgctggcggccggcgccaacccggtcgaactggttgaagggcttgag
ctcgccgtggacgagaccatctcggcgctgaagcgatccgcgaagagcgtcgacggcgcc
aagggcattcgcgccatcgccaccatcgccgccaacgatgtcaggctcggcgccatggtc
gcggaggccttcgagcgcgccggcaatcatggcatcgtcgccgtcgaattcggctcaacc
gtcgagacgacgctggaagtggtcgaaggcatggcgttcgagcgcggctatctctcgcat
cacatggtcaccgacgtcgagcggatgcaggtggtgctcgacgagccgtatattctgatg
acggatcacaagattctcgccatcgacgagttgaagggggtgtttgcgctgatcgaaaag
agcggccgaccgctcctgatcatcgccgaggaggtggcgcccccggtcatcatgatgctg
ctgtcgcgacgcgagaagaataatttcaaggtcgcggcgatccatccgccggaatatggc
cattggcgcaaggcgatgctggaagacatcgcggtggcgaccggcggccgggtcatctcc
aaggatctcggcggcaccgtcgagcgcgccagtctcgaggatctcggctccgcgcggcag
gtccggatttcgtcgtcgaagaccctgatcactgccggccatggcaagccgaagatggtt
gaggcccggcgcgagcaggtgtcgcggcaatacgaagccgcgccggaaaacatcgagcgc
gacaaatttctggagcggctcgccaaactgtccggcggcaccgcgatgatcctggccggc
ggcgcgacgccggtggagcagaagcggcgcgcgcagctgatcgaggattcgatcaatgcg
acgcgtgcggcgatcgaagagggcgtcgtgcccggaggcggcgtggcgttgatccgggta
gccgcggagctcgacggcttgatcaatcggctggaaggcagcgcgaggcagggcgccgaa
ctggtgcagcgttcgctcagtcagccgcttgcctgcatcgttgccaattgcggacgcggc
gacagcaaggctgcggttgagaaggtcgccaaggccagcaatggctacggcttcgacgcc
cgcaccggcaccacggtcgacatgatcaagtccggcattatcgatccggtcaaggtcagc
tactgcgcgatgcgcaatgccggctcggtggcggctctgatcctcaccacgcagacgctg
atcgccaagaggccggacaattacgatccgacgtcggggccggccatcggcggtggcgcg
gagttgctttga
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