Tardiphaga sp. vice154: FIU28_23710
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Entry
FIU28_23710 CDS
T11090
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
tarv Tardiphaga sp. vice154
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tarv03000
]
FIU28_23710
Transcription factors [BR:
tarv03000
]
Prokaryotic type
Helix-turn-helix
Other families
FIU28_23710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_23
HTH_8
AAA_5
HTH_28
PAS_4
HTH_7
HTH_30
PAS
AAA_2
AAA_16
PAS_8
HTH_38
HTH_29
HTH_Tnp_1
MLTR_LBD
Mor
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QDM23828
LinkDB
All DBs
Position
5047912..5049792
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AA seq
626 aa
AA seq
DB search
MLVAGRRVENAWMALEQRGAPPAGFLSVDIYDSWMRCIALGLDMRHPPPQEFVSPAALRH
EQQRCSLVRGLALAEMHTLHQQISGSNFMVAFANADGLLLDIITDRSFSDASDAASIKPG
AVWTERCCGTNGLGTAAMLKRPIAVHGDQHFFRRYNNLTCVAAPIFAPDGEVAGILDASS
DCLSRQTHTQALVAMAATQIENGLFREFHRGNILIAFHNRGEYLHTLSAGLLAVDEDGKI
LAANRAARVLLHGLPAAPGKRFVDIFRTEFSRFVDEGRSKERQGLEDEVGSQFVATIENT
RLFPMVRALAKPRLSPPNAIGREFVSSDLTIAAIVRQVEIAAARKMPILVRGETGTGKEQ
LARHAHAASRRTGPFVPVNCAAIPESLIEAELFGYSEGAFTGAKKGGSAGLFKEADGGTL
FLDEIGDMPVALQAVLLRFLDDWTVRPVGGTKRQVDVLLVSATNANLDDSIAKGRFRSDL
LFRLNTLEVTLPRLRERSDFADIARHLLAKIDPSAGLTQSAIDRLAEQDWDGNIRELRNV
LSRLSLTEQGGLIGEAAVEELVGHPRSKPLPGGRSASGGLKSDLRDLQRAHLLTAYAESG
NNVSKTARRLGVSRNMIYRVLRENHD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgctggttgcgggtcggcgcgtcgaaaacgcatggatggcgctggagcagcgaggggcg
ccgccggccggatttctttcggtcgatatctacgatagctggatgcgctgcattgcgctc
ggcctcgacatgcgccacccgccgccgcaggaattcgtcagccccgcggcgctccgccac
gagcagcagcgttgttcgctggttcgaggtctggcgctcgcggagatgcacacactgcac
cagcagatctccggctccaatttcatggtggcctttgccaacgcggatggattgctactc
gatatcattacagaccgaagcttcagcgacgcctccgacgctgccagcattaaacccggc
gcggtgtggacagagcgttgctgtggcaccaacggcctcggcaccgcggcgatgctgaag
cgaccgatcgccgtacatggcgatcaacacttcttccgtcgctataacaatctcacttgc
gtggcggcaccgattttcgcgcctgatggagaagtcgcgggaatcctcgacgcgtcgtcc
gattgcctgtcgcgccagactcatacccaggcgctggtcgcaatggccgcgacacagatc
gagaacggcctgtttcgcgaatttcatcgcggcaatatcctgatcgcgttccacaatcgc
ggcgagtatctgcatacgctgagtgccggcctgcttgccgtcgacgaagacggcaagatc
ctggcggccaatcgggccgcgcgcgtattgctgcacggcctcccggccgcgcccgggaag
cgcttcgtcgacatcttccgcaccgaattcagccgctttgtcgatgagggccgaagcaag
gagcgccaaggtctggaggatgaggtcggcagccagttcgtcgcaacgatcgagaacacc
cgactgtttccgatggtgcgcgcgctggcgaagccgcgcctgtctccgccgaacgcaatt
gggcgggagttcgtctcctccgacctgacgatcgccgcgatcgtgagacaggtcgagatc
gcggcagcgcgcaagatgccgatcctggtgcgcggcgaaaccggcaccggcaaagagcaa
ctggcgcgtcacgcccacgccgccagccggcggacggggccgttcgtgccggtcaattgc
gcggccattccggaaagcctgatcgaggcggaattgttcggctattccgagggcgccttc
accggcgccaagaagggcggctctgcgggcttgttcaaggaggccgacggcggcacgctg
ttcctcgacgagatcggcgatatgccggtggcgttgcaggccgtgcttttgcgtttcctg
gacgattggacggtgcgcccggtcggcggcaccaagcggcaggttgatgtcctgctggta
tccgccaccaatgccaatctcgacgattcaatcgccaaaggccgttttcgatccgacctg
ctgtttcgcctcaacacccttgaggtgacattgccgcggctgcgcgagcggtctgacttc
gccgacattgcgcggcatctcttggccaagatcgatccttcagccggcctgacccagagc
gcgatcgatcgactggccgaacaggactgggatggcaatattcgggaactacgcaatgtg
ctgtcccggctatcgctgaccgaacaaggtggcctgatcggcgaggccgcggtggaagaa
cttgtcgggcatccccggagcaagccgcttcccggtggccgatcggcgagcggcgggctg
aagagcgatctgcgagatctgcagcgagcccatctgctgaccgcttatgccgagtccggc
aacaacgtcagcaagactgcgcgccgtctcggcgtctcgcgcaacatgatctaccgcgtt
cttcgggaaaaccacgactga
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