Tardiphaga sp. vice154: FIU28_25290
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Entry
FIU28_25290 CDS
T11090
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
tarv Tardiphaga sp. vice154
Pathway
tarv02020
Two-component system
tarv02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
tarv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FIU28_25290
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FIU28_25290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tarv02035
]
FIU28_25290
Bacterial motility proteins [BR:
tarv02035
]
Flagellar system
Chemotaxis proteins
MCPs
FIU28_25290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
dCache_3
HAMP
AAA_13
DUF948
ATG17_like
Mucin15
GT2_TM_C
Motif
Other DBs
NCBI-ProteinID:
QDM24093
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Position
5393386..5395347
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AA seq
653 aa
AA seq
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MQTLTSISARMVLAITLVAAGACGVVAAFSSWQQQAIVDVALNRESQNDYANLTAALNAD
TRAALAVADALASMPQLKDVVRARDRAGTLALLKEAMQRITPSGLELITIQIPPAVAFAR
AHNVTAFDDDLSARRKMVVQVMNTGKAVGGIEAGRDVLNIFGTSPMRDGNTVVGTVDIGA
PFGKTFVNSMKSRFKLDVAIHQLDGQSTKTLATTLTGATADSSAIRRAMGGETVIQFGET
NGRPSATTFGVIRNFSDQPVAVFEIVRDVTAYAALTRSALTWLVIASVCVLLLAAGIATF
VGRGMAKPIRTLEAAMRAIAAGNHAVAIPGAGRKDEIGSMAGAVAIFKEGLIETDQLRAA
QEQQRERSQVERRDSMNALAARFESGVGGVVDAVGSAAGELRSTAQSMAATASDATRQTA
AVAAASEVATQGAQAVAAAIEELNASISEIAQQVNESARVAGDAVNQANATNAEVQSLAA
AAQKIGDVVNLISEIAAQTNLLALNATIEAARAGEAGRGFAIVASEVKALATQTSKATDE
ISAQVSAIQNATRQSVGSIQGITATIGKVSEIASAIAAAVEEQGAATLEIARNVADAARG
TGEVSENIVGVNEAARETGAAASRVVESAADLSQSGKDLKTQVDAFLREVRAA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcagacactcacgtccatttcagcacgtatggtcctcgcaatcacgctagtggcggct
ggtgcctgcggcgtcgttgctgccttcagctcatggcaacaacaggccatcgtcgatgtc
gcgctgaaccgggaatcgcagaacgactacgccaacttgaccgccgcgctcaacgctgac
acacgggccgcgcttgccgtcgcggacgcgctggcgtcgatgccgcagctcaaggatgtg
gtgcgcgccagggaccgggccggcacgctcgcattactcaaggaagccatgcagcggatc
acgccgagcggcctagaactgatcaccatccaaattccgccggctgtcgcctttgcgcgc
gcccacaatgtcaccgccttcgacgacgacttgtcggcgcgacgcaagatggttgtgcaa
gtgatgaataccgggaaggccgtcggcggcatcgaggccgggcgcgatgtgctaaacatt
tttggcaccagtccgatgcgcgacggcaatactgtggtcggcacggtcgatattggcgcg
ccgttcggtaagacattcgtcaacagcatgaagagccgcttcaagttggacgtcgcgatc
catcagctcgacgggcagtccaccaagacgctcgccacaacgctgaccggtgcgaccgct
gacagttccgccatccgccgcgccatgggcggtgagacagtgatccagttcggcgaaacc
aacgggcgtccctcggccaccactttcggggtcatcaggaacttctcggatcagccggtt
gcggtgttcgagatcgtgcgcgatgtaaccgcctacgcggcgctgacgcgcagcgcgctg
acttggctggtcatcgcttctgtgtgcgtgctgctgctggcggcgggcatcgcgaccttt
gtcggtcgcggcatggcgaaaccgatccgcacgctggaagcggcgatgcgcgccatagct
gccggcaaccatgcggtggcgattcccggcgccggccgcaaggacgagatcggctccatg
gccggcgccgtggcaatcttcaaggaaggcctgatcgagacggatcaattgcgcgcggcg
caggagcagcagcgcgaacgcagccaggtggagcgccgcgatagtatgaatgcgctggcg
gcgaggttcgagtccggtgtcggcggcgtggttgacgccgtgggatccgcggccggcgaa
ctccgcagcaccgcgcagtccatggccgccaccgcctccgacgctacccgccagactgcc
gcagtcgccgccgcttctgaagttgccacccaaggcgcgcaggccgtcgccgccgcgatc
gaggagctcaatgcctcgatcagcgagatcgcccagcaggtcaatgaatccgcccgcgtt
gcaggcgacgccgttaaccaggccaacgccactaatgccgaagtccagagcctcgccgcc
gccgcgcaaaagatcggtgatgtggtaaacttgatcagcgagattgctgcgcagaccaat
ttgctggcgctcaacgccaccatcgaggcggcgcgtgctggcgaagccggccgcggcttt
gcgatagtcgcgtccgaagtgaaagcactggcgacgcagacgtccaaggcgaccgacgaa
atatcggcgcaggtcagcgcgatccagaacgccacgcggcagtcggtggggtcgatccag
ggcattaccgcgaccatcggcaaggtcagcgagatcgccagtgcgattgctgccgcggtc
gaagaacaaggcgcggctaccctggagatcgcccgcaacgtcgccgacgccgcccgcggc
accggcgaagtttcggaaaacatcgtcggggtcaatgaagccgctcgcgaaaccggtgcc
gccgcttcacgcgtcgtggaatccgccgcggacctatcgcagagcggcaaagatttgaag
acgcaggtcgatgcatttttgcgggaagtaagagcggcgtag
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