Taylorella asinigenitalis MCE3: TASI_0958
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Entry
TASI_0958 CDS
T01634
Name
(GenBank) macromolecule metabolism protein
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
tas
Taylorella asinigenitalis MCE3
Brite
KEGG Orthology (KO) [BR:
tas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tas03019
]
TASI_0958
Enzymes [BR:
tas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TASI_0958
Messenger RNA biogenesis [BR:
tas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TASI_0958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
nSTAND3
T2SSE
AAA_25
AAA_22
NACHT
SRP54
AAA_23
AAA_30
HA2_N
SLFN-g3_helicase
PhoH
ResIII
TsaE
TMP_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AEP36719
UniProt:
G4QB98
LinkDB
All DBs
Position
complement(974276..978121)
Genome browser
AA seq
1281 aa
AA seq
DB search
MLNSPQDIVLNGIKFNSSLPVNQKLKELSELIKKHQVVIVSGETGSGKTTQLPKLCLAMG
RGTKGLIGHTQPRRIAAISVAKRISEELGPSRINEVAYQVRFQVKSSADTKVKLMTDGIL
LAETQSDRLLKKYDTIIIDEAHERSLNIDFLLGLLKSILPKRPNLKVIITSATIDAAKFS
EHFKSSSGVPAPVIEVSGRLYPVEIRYRPLESERPLEDGNDPANDKDKEPLEDGIVRAVD
ECTREGGGDILVFLPGEREIREASDALFDAVNRRQIERLEVLPLFSRLSQNDQERIFKPT
TSARRVILATNVAETSITVPGIRFVVDSGLARVKRYSWRNKVEQLHIEKISRASANQRAG
RCGRVASGVCIRLYDEEDFLRRPEFTDPEILRSSLASVILQMKSLRIGDVVAFPFLESPT
SRAIADGYQILHELGAISGQQNEKTYLTRVGMSLAQLPLDPKIARIILAGRQNNCLKEIL
IIASALSVADSRERPYDQKNKSDQLHAKFKDEKSEFMSFLKLWQWYWDLHANKISNRKFN
DELKKNMVSPLRMREWIDIHNQLLTIVKERKWTVLESEATYEQIHKSLLTGLLGNIGTKS
ETDPNFYQGTRNVKFLIHPLSGMQKKASRWVMAAELVETSKIYARVVAQIDPRWVEGIAT
HILQKSWSDPRWDFKRGQVVANERATLYGLQIYQGRKVHYGRINPEHAREIFIREALVPG
DMQARIPFVEHNLNLIKEIEHMEHKSRRKDILVDDALIYEFYASKIPQDISQTASLEAWH
KKLNEAERKSLFLIKEDLMQHSAEGVSTEYFPKKLMYSGVELSASYHFEPGSPKDGVTVT
VPDYALSQINQETTQWLVPGMLKEKVQLLAKTLPQKIRRHLVPIPEYAREFYLAHEAQLK
EPKKDLIDAIIDHAWQSRKVRIAREDFKSENLPAHMHMIFKVVDSYGRMLSAGRNLAQLK
AEHADQSLHSFQKLAQKNLSQTNMDTDSQIVDWSFGVLPEIMEIRKNRESLVGYPALVDE
GTHCSIDVYDTPEMAMQVHFKGVLRLFYLGLNEQVKYWKKNIPNIDRLGLMFMNLGTQAE
LIDQIIEAALRQSAMAEALPQDKEQFEARKIQAKEKLGLIINEISILLEQILDLYKQLEK
KMQGLKVLVAKGAKNSDAKLIEEAYIDIKQNLEFLVSNDFLMRHHYKALQQIPRYLKSAI
ARTDKLLRDINRDSKNLNEIRNFQNKINKKLSELRGQPDPKLNDFIWMLQELRVALFSQE
LKTPYPVSAKRLEKAWTQINN
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgcttaattcccctcaagatattgtgcttaatgggattaaatttaattcctctcttcct
gtaaatcagaagctaaaagaactctctgaattaataaaaaaacatcaggtcgtaattgta
agtggcgagactgggtcaggtaaaactacgcagcttcctaaattgtgtttggcaatggga
cgtggtaccaaaggcttaatcggccacacacaacctagaaggatagcagctatttctgta
gccaaaagaatttccgaggaacttggaccttcgcggattaatgaggtggcttatcaggtt
cgttttcaggttaaaagttccgctgataccaaagtcaagttgatgaccgatggtattttg
cttgctgaaacgcaatcggataggcttcttaaaaaatacgacacaataatcattgatgag
gctcatgagagaagtttaaatatagattttttgcttggcttattaaagtcaatacttcct
aaacgtcctaatcttaaggtcataattacatccgcaacaattgatgcagctaaattttct
gagcattttaaatcttcctctggagttcctgcccctgtaattgaagtgtctggaaggctc
tatccagttgaaattcgttatagaccacttgagtctgaaagaccacttgaagatggcaat
gatcccgcaaacgacaaggataaggagcctctagaggatggcatagttcgtgcagttgat
gaatgcacaagagaagggggcggagacattctcgtctttcttccaggcgagagagaaatt
cgggaagcttcggatgcattgtttgatgcggtgaatagaaggcagattgagagattagag
gttttgccccttttttctaggttatcgcaaaatgatcaggagcgaatttttaaaccaact
acatcagccagacgagtaatattggccactaatgtggctgagacatccattacagttcca
ggcatacggtttgtagtcgactctggtcttgcacgtgtgaagcgatattcttggcgaaac
aaagtcgaacaactgcatatagagaaaatatctcgtgcttcagctaaccaaagggcgggc
cgttgcggtcgtgtagcctcaggggtgtgtatacgactttatgatgaagaagatttcttg
cgtcgtcctgaatttactgaccctgaaatattaagatcatctcttgcatctgttatcttg
cagatgaaatctttgcgtataggggatgtggttgcgtttcctttccttgagagtccgaca
agtcgtgccatcgccgatggatatcagatcttacatgagttaggtgcaatttctggtcag
cagaatgaaaaaacatatctcacgcgcgttggtatgtctcttgcacaattgccattagac
ccgaaaattgctcgcataatattagctggtcggcaaaacaattgcttaaaagaaatattg
attattgcatctgctttgagtgtggccgattcccgcgagagaccttacgatcagaaaaat
aaaagtgatcaattgcatgcgaaatttaaggacgagaaatcagaatttatgtctttcctt
aaattgtggcaatggtactgggaccttcacgcaaacaaaatttccaatcgtaagtttaac
gacgaacttaagaaaaatatggtttcacctcttcgcatgcgtgagtggatcgatatccat
aatcaacttcttactatagttaaagagcgaaaatggacggtgcttgaatctgaggcgact
tatgagcaaattcataaatccttacttacgggattgttaggaaacataggtacaaaaagc
gagacagacccaaatttttatcaaggaacgaggaacgtaaaattcttaatccatccattg
tcaggtatgcagaaaaaagcaagtcgatgggtgatggcggcagaacttgtagagacaagc
aaaatttatgcgagagtggtggcacaaattgatcctcgatgggtcgagggcattgccacg
catatattgcaaaaaagctggagcgatccgagatgggattttaagcgagggcaggtcgtt
gcaaatgagcgtgcaacgctatatgggctacaaatctatcaggggcgtaaggtgcattac
ggacgcatcaatcctgagcatgcacgtgagatatttattcgcgaggctttagtccctggt
gatatgcaagcacgtattccgtttgtggagcataatttaaatcttattaaagagattgag
catatggagcataagtcgcgcagaaaggatattcttgtcgacgatgctttgatatatgag
ttttatgcaagcaaaattcctcaggatattagccaaactgcaagtcttgaggcgtggcat
aaaaagcttaatgaggctgagagaaaaagtctatttcttattaaagaagacttgatgcaa
catagtgctgagggggtttccacagaatatttccctaaaaaactaatgtattcaggtgtc
gagctttctgccagctatcattttgaacctggatctccaaaagatggggtgacggtcacg
gtgccagattatgcactaagtcaaattaatcaggagactacgcaatggcttgtaccaggc
atgttgaaggagaaggtgcagttattagcgaagacattgccacagaaaataaggcgtcat
cttgtaccgattccagagtatgcgagggaattttatcttgctcacgaagcacagttaaag
gagcctaaaaaggatttgatcgacgcaattatcgatcatgcatggcagagcagaaaggtt
cgcattgcccgcgaggattttaagtcagagaatcttccagctcatatgcatatgatattt
aaggttgtcgattcttatgggcgtatgctttcggcaggacgcaatctagctcaacttaag
gctgaacatgcggatcaatcgttgcatagctttcagaaactggctcagaagaatctgtcg
caaacgaatatggatacggattcacaaattgtggactggagctttggagttttgcctgaa
attatggagattcgcaaaaatagggagtctttggttggttatccagctttagttgatgag
ggtacgcattgttctattgacgtttatgatacccctgagatggcaatgcaagtgcatttc
aagggtgtgcttagacttttttatctaggattaaatgagcaggttaagtattggaaaaag
aatataccgaatattgatagactaggtcttatgtttatgaatctgggtactcaagcggaa
ttgatagatcaaattattgaagcggctttaagacagagtgctatggcggaggcattgcca
caagataaggagcaatttgaggcacgcaaaattcaagcgaaagaaaagcttggtcttatt
attaacgaaatttctattttgctagagcagattttagatctttacaagcagctagaaaaa
aagatgcaagggcttaaagtcttggtcgcaaagggggcgaaaaattctgatgcgaagcta
atcgaggaagcttatatagacataaaacaaaacttggaatttttagtgtccaatgatttt
ttgatgcgacatcattataaagctcttcagcagattccacgatatttgaaatcagcgata
gctagaactgataagcttcttcgtgatattaatcgggattctaaaaacttaaatgaaata
agaaattttcagaataaaattaataaaaagctatccgagcttaggggccaacctgacccg
aaattaaatgattttatttggatgttgcaggaattacgtgtggctttattttcgcaagaa
ctcaaaacgccatatcctgtgtcagctaaaagactggaaaaagcttggacacaaattaat
aattaa
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