Trichoderma asperellum: 36607149
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Entry
36607149 CDS
T10296
Symbol
TrAFT101_003841
Name
(RefSeq) uncharacterized protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
tasp Trichoderma asperellum
Pathway
tasp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
36607149 (TrAFT101_003841)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
36607149 (TrAFT101_003841)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
36607149 (TrAFT101_003841)
U7-dependent histone pre-mRNA processing factors
36607149 (TrAFT101_003841)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
Spo7_2_N
RRM_5
Motif
Other DBs
NCBI-GeneID:
36607149
NCBI-ProteinID:
XP_065983117
LinkDB
All DBs
Position
2:join(4668704..4668755,4668833..4668958,4669031..4669137,4669188..4669820)
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AA seq
305 aa
AA seq
DB search
MSTRPPSRVVFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTD
SASSAVRNLNEYEIMGRKLRVDFSNEQKSTDDDSQTPGQNTGASNGGAASGYNTQSTPLP
PLPAGKEIPPGLTCTDAISRTLNTLPPPQLLDILSQMKTLATSEPQRATELLQQAPQLAY
AVFQSLLLMGLVSPEAIQSVVDPNAPPPPAANYPSGPIAGYPGIPVANHTPPVTAMPYAP
PPANNTGYVPPAAAPPAAAPPAMGQDPDALMRAVMELPQAQIDMLPEADRQQIMALRATF
AGQRR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactagacctccttcaagggtcgtctttgtgggaaacatcccgtacggcctctct
gaggagcaaatcacagatattttcagcagcgctggaaaggtagagcgctttcgcctcgtc
tacgactcggaaactgggcggccaaaagggttcggatttgcagactatcccgataccgac
tctgcttcctcggctgtccgcaacctaaacgaatatgaaatcatgggccgaaagcttcga
gtcgacttttcgaacgagcagaagagcaccgatgatgatagccaaacacctggacagaat
actggtgcctcaaatggcggcgctgcttcgggatacaacactcagtcaacaccccttccc
ccactcccagctggaaaagagataccaccaggcttgacttgcaccgatgccatttcaaga
acactcaataccttgccgccaccccagctattagatatcctaagtcagatgaagactttg
gccacatcagaaccccagcgagcgacagaacttcttcaacaggcccctcagctagcctat
gccgtcttccagtcactacttttgatgggtcttgtgtctcccgaggctatccagtctgta
gtagacccgaacgcgccacctccacccgccgccaattacccatcgggacccattgctgga
tatcctggcatccctgtcgcgaatcacacaccaccggtcaccgccatgccgtatgcacct
cctccggcaaataatacgggttatgttcctccagcggcggcaccacctgcagcagctcct
ccagctatgggccaagatccagatgctctgatgcgagcagtcatggagcttccccaggct
cagattgacatgcttccagaggctgataggcagcaaattatggctctcagggctacgttt
gctggccagcgacgctaa
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