Trichoderma asperellum: 36607821
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Entry
36607821 CDS
T10296
Symbol
VPS4, TrAFT101_002755
Name
(RefSeq) Vacuolar protein sorting-associated protein 4
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
tasp Trichoderma asperellum
Pathway
tasp03250
Viral life cycle - HIV-1
tasp03272
Virion - Hepatitis viruses
tasp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
36607821 (VPS4)
03272 Virion - Hepatitis viruses
36607821 (VPS4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
36607821 (VPS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tasp04131
]
36607821 (VPS4)
03400 DNA repair and recombination proteins [BR:
tasp03400
]
36607821 (VPS4)
Membrane trafficking [BR:
tasp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
36607821 (VPS4)
DNA repair and recombination proteins [BR:
tasp03400
]
Eukaryotic type
Check point factors
Other check point factors
36607821 (VPS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
RuvB_N
AAA_16
TIP49
AAA_14
RNA_helicase
AAA_22
DUF815
AAA_24
AAA_5
IstB_IS21
PrkA
AAA_17
AAA_25
AAA_18
AAA_33
NPHP3_N
AAA_2
Use1
AAA_7
Parvo_NS1
nSTAND3
Mg_chelatase
AAA_28
NRDE-2
PhoH
NACHT
bpMoxR
Torsin
Cytidylate_kin
Motif
Other DBs
NCBI-GeneID:
36607821
NCBI-ProteinID:
XP_024763869
LinkDB
All DBs
Position
2:join(1336444..1337066,1337134..1337584,1337651..1337872)
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AA seq
431 aa
AA seq
DB search
MSVNFRDRAIAEVQKAIAADNDKEYQKAFDLYMSSMELWVKALKWEKNKAIKATMQEKMA
TYLDRAEKLKQFLQSESESNANGGKTPMGANGSSAGGKAKPSAEDEDSKKLRNALSGAIL
QERPNVRWEDIAGLEGAKETLKEAVVLPIKFPTLFQGKRQAWKGILLYGPPGTGKSYLAK
AVATEANSTFFSISSSDLVSKWMGESERLVKLLFSMARENKPSVIFIDEIDALCGPRGEG
ESEASRRIKTEILVQMDGVGNDSKGILVLGATNIPWQLDAAIRRRFQRRVHIGLPDINGR
ARMFKLAIGDTDTALQPSDYNTLATLSEGFSGSDISNVVQHALMRPVRKILQATHFKPVM
KNGNRMLTPCSPGDDEKIEMTYDDVKPDELLAPDVSLADFEIALGDSHPTVSKDDIEKQI
EWTNEFGSEGA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaactttcgagaccgggctatcgccgaggtccaaaaggctattgccgcggac
aacgacaaggaataccaaaaggccttcgatctctacatgtcgtcgatggagctgtgggtc
aaggcgctgaagtgggagaagaacaaggccatcaaggccactatgcaggaaaagatggcc
acctacttagaccgcgccgaaaagctgaagcaattcttacaatccgagagcgagagcaat
gcgaacggcgggaaaacccccatgggggccaatggatctagcgcgggaggcaaggccaag
ccgtcggcagaagacgaagatagcaagaagcttcgcaatgcgctgtcaggcgccattctt
caagagcggccaaacgtgaggtgggaagatattgctggattggagggtgccaaggaaacg
ctgaaggaggccgtcgtgctgcccatcaaattcccaactctgtttcaaggcaagcgacaa
gcatggaaaggcatcttgttgtatggccctccaggaaccggaaagagttacttggccaaa
gccgtagcaacagaggcaaacagtaccttcttcagtatcagcagttccgatctggtgagc
aaatggatgggtgagagtgaaaggctggtgaaactcttattctccatggcgagagagaac
aaaccgtccgtcattttcattgacgagattgatgctctctgtggccccagaggcgaaggt
gaatccgaagcttctcgacgaatcaagaccgaaatcctggtgcagatggatggtgtcggg
aatgacagcaaaggcatccttgtcctgggagcgaccaatattccctggcaactagatgct
gctattcgtcggcgattccagaggcgtgttcacattggattgcctgacattaatgggcgt
gcaaggatgttcaagcttgctattggcgatacagacactgctttgcagcctagcgactat
aacactctggcgaccttgtcagagggcttctcgggtagcgatatcagcaacgttgtccaa
catgctctcatgaggccggtccggaaaattctacaagctacacatttcaagccagtaatg
aaaaatggcaaccggatgttaactccttgttctcctggagacgacgagaagattgaaatg
acgtacgacgatgtaaaaccagacgaactgctggctccggatgtgtcactcgcggatttc
gagatcgctttgggcgattcacatccgacggtgtccaaagacgatatcgagaagcagatt
gagtggacaaatgaatttggcagcgagggagcttag
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