Trichoderma asperellum: 36608088
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Entry
36608088 CDS
T10296
Symbol
RFC4, TrAFT101_008867
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
tasp Trichoderma asperellum
Pathway
tasp03030
DNA replication
tasp03410
Base excision repair
tasp03420
Nucleotide excision repair
tasp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
36608088 (RFC4)
03410 Base excision repair
36608088 (RFC4)
03420 Nucleotide excision repair
36608088 (RFC4)
03430 Mismatch repair
36608088 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tasp03032
]
36608088 (RFC4)
03036 Chromosome and associated proteins [BR:
tasp03036
]
36608088 (RFC4)
03400 DNA repair and recombination proteins [BR:
tasp03400
]
36608088 (RFC4)
DNA replication proteins [BR:
tasp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
36608088 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
36608088 (RFC4)
Chromosome and associated proteins [BR:
tasp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
36608088 (RFC4)
DNA repair and recombination proteins [BR:
tasp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
36608088 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
36608088 (RFC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_14
nSTAND3
AAA_22
AAA_16
RCF1-5-like_lid
RuvB_N
Viral_helicase1
AAA_3
DNAX_ATPase_lid
nSTAND_NTPase5
Rad17
Mg_chelatase
MeaB
AAA_assoc_2
DNA_pol3_gamma3
Gp44_lid
NTPase_1
AAA_11
KTI12
AAA_19
AAA_5
ATPase_2
NB-ARC
MipZ
AAA_28
AAA_18
Motif
Other DBs
NCBI-GeneID:
36608088
NCBI-ProteinID:
XP_024761711
LinkDB
All DBs
Position
5:join(2143856..2143959,2144032..2144252,2144315..2145063)
Genome browser
AA seq
357 aa
AA seq
DB search
MPAAKPEEKGESSNATSKAVLAASSNGSPNYELPWVEKYRPVFLDDVVGNTETIERLKII
AKEGNMPHVIISGMPGIGKTTSVLCLARQLLGESYKEAVLELNASDERGIDVVRNRIKGF
AQKKVTLPAGRHKLVILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQS
RCAILRYAKLTDEQVVKRLMQIIEAEKVEYSDDGLAALVFSAEGDMRQAINNLQSTWAGF
GFVSGDNVFKVVDSPHPIKVQAMLKACYEGNVDSALDTLRELWDLGYSSHDIISTMFKVT
KTMPTLSEHSKLEFIKEIGFTHMKILEGVQTLLQLSGCVARLCKLNMDPKRFKPVSK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgcaaagccagaagaaaagggcgagtcctccaatgccacgtcaaaggcagta
ttggcggcatcttccaatggatcacccaactacgagctgccatgggtggaaaagtaccgt
ccggtgttcttggacgatgtcgttggtaacacggagactattgagcgattgaagataata
gcaaaggaaggaaacatgccccatgttatcatctcgggcatgcctggtattggaaagaca
accagcgttctctgcctcgcccgccagctactgggagaatcgtacaaggaggccgtcctt
gagctcaatgccagtgacgaacgaggtattgacgttgttcgaaacagaataaagggattt
gcacaaaagaaggtcactctgccagctggcagacataagctagtcattctcgacgaagcc
gacagcatgacgtccggtgcccagcaggctcttcgaagaactatggaaatctactccaac
accaccagatttgcattcgcttgcaatcagtccaataagatcatcgaaccgctacagtca
cgatgcgcaatccttcgatacgccaagttgacagatgaacaagtcgtcaaacgattgatg
cagatcatcgaggcggagaaggtcgaatacagcgatgacggcttagccgctttggtgttc
agtgcagagggagatatgcgacaggctatcaataacctgcagtcgacgtgggctggtttc
ggcttcgtctcaggggacaacgtcttcaaggtagtcgattcaccacatccaatcaaggtg
caagccatgctgaaggcctgttacgagggaaatgtcgactcggctctggataccctccgg
gagctgtgggatttgggatactcgagccatgatattataagcacaatgttcaaggtcaca
aagacgatgccgacgcttagcgaacattcgaagctggaattcatcaaagaaattggcttc
acccatatgaagattctagaaggtgtccagacactacttcagctatcagggtgtgtcgcc
cggctatgtaaactgaacatggatcccaaaagatttaaaccggtgtcaaaatag
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