| Entry |
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| Symbol |
CDC48, TrAFT101_009987
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| Name |
(RefSeq) AAA ATPase cdc48
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| KO |
| K13525 | transitional endoplasmic reticulum ATPase |
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| Organism |
tasp Trichoderma asperellum
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| Pathway |
| tasp04141 | Protein processing in endoplasmic reticulum |
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| Brite |
KEGG Orthology (KO) [BR:tasp00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
36608267 (CDC48)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:tasp03019]
36608267 (CDC48)
03009 Ribosome biogenesis [BR:tasp03009]
36608267 (CDC48)
04131 Membrane trafficking [BR:tasp04131]
36608267 (CDC48)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:tasp04147]
36608267 (CDC48)
Messenger RNA biogenesis [BR:tasp03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
36608267 (CDC48)
Ribosome biogenesis [BR:tasp03009]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
36608267 (CDC48)
Membrane trafficking [BR:tasp04131]
SNARE
SNARE associated proteins
Others
36608267 (CDC48)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
36608267 (CDC48)
Exosome [BR:tasp04147]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
36608267 (CDC48)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
6:complement(join(1642348..1642937,1643002..1644493,1644551..1644800,1644855..1644910,1644968..1644995,1645067..1645110))
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| AA seq |
819 aa
MASQPEEHKKKVNLTDPSGAEIKHEDDTATAILKKKKKPNQLMVTDAVNDDNSIIALSEA
TMDALQLFRGDTVLVRGKKRKETVLIVLADEELDEGSARINRVVRHNLRVKHGDVITISP
CPDIKYAKRIAVLPIADTVEGLTGSLFDVFLAPYFREAYRPVKQGDLFIVRGGMRQVEFK
VVEVDPPEYGIVAQDTVIHCEGEPIQREEEENNLNEVGYDDIGGCRKQMAQIREMVELPL
RHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESES
NLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVM
AATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLGDDVDLEQIAAETH
GYVGSDVAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPSAL
REVAVVEVPNVRWEDIGGLEEVKQDLRESVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTG
KTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIA
KARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLI
YVPLPDEPGRLGILKAQLRKTPVAADIDLGYIAAKTHGFSGADLGFITQRAVKIAIKESI
SLDIERTKAREAAGDNMDVDEDAEDPVPELTKAHFEEAMQMARRSVSDVEIRRYEAFAQQ
MKNAGPGAYFKFPDGADAGAAGNAGNSFGDAGNDDDLYD |
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| NT seq |
2460 nt +upstreamnt +downstreamnt
atggcttctcagcctgaagagcacaagaagaaggtcaacttgaccgacccctccggcgcg
gaaatcaagcacgaagatgacaccgccactgccattctcaagaagaagaagaagcccaac
cagctgatggttaccgatgccgtcaatgatgacaacagcattatcgccctgtccgaggcc
accatggacgccctccagctcttccgcggtgacaccgtccttgtacgaggcaagaagaga
aaggagacagtcctgatcgtccttgcagacgaggaactggatgagggaagtgctagaatc
aaccgtgttgtccgccataacctcagagtcaagcacggtgacgtgattaccatctccccc
tgccccgatatcaaatatgccaagcgaattgctgtgctgcctattgccgacaccgtcgag
ggccttactggttcactattcgacgttttcctcgccccatacttccgcgaagcctacaga
ccagttaagcaaggagacttgtttatcgtacgtggtggtatgaggcaagttgaattcaag
gttgtcgaggtggatcctccggaatacggcatcgtagctcaggataccgttattcactgc
gagggcgagcctatccagcgagaggaggaagagaataacctgaacgaggtcggctatgac
gacattggtggatgccgtaagcagatggctcagatccgagaaatggttgagcttcctctc
cgtcaccctcagcttttcaagtcaattggtatcaagccgcctcgtggtgtcttgctctac
ggtcctcccggtaccggtaagacgctcatggctcgtgctgttgccaacgagactggcgct
ttcttcttcctcatcaacggccccgagatcatgtctaaaatggctggagagtccgagtcc
aatctgcgaaaagccttcgaggaggcggagaagaactcacctgctatcatctttatcgat
gaaatcgattccatcgcccccaagcgtgaaaagaccaacggtgaagttgagcgtcgtgtc
gtctcccagctccttaccctcatggacggtatgaaggctcgttccaacgttgtcgtcatg
gccgccaccaaccgacccaactccattgacccggctctgcgacgattcggtcgtttcgac
cgtgaggtggacattggtattcccgacccaactggccgtctggagattctccaaatccac
accaagaacatgaagctgggcgatgatgtcgacctggagcaaattgctgccgagacccac
ggttacgtcggttctgatgttgctgctctctgctccgaagccgccatgcagcagattcgt
gagaagatggatctcatcgatctcgatgaggacaccatcgacgccgaagtcttggactcc
ctaggtgtcaccatggagaacttccgattcgctctgggcgtgtccaacccctctgctctt
cgtgaggttgccgtcgtcgaagtccccaacgtccgctgggaggatatcggtggtctcgaa
gaggtcaagcaggatctccgagagagtgtccagtatcctgtcgaccaccccgagaagttc
ctcaagtttggtctctccccgtccagaggtgttcttttctatggacctcctggtactggt
aagacaatgttggccaaggccgttgccaacgagtgcgctgccaacttcatctccgtcaag
ggacccgaacttctcagcatgtggttcggtgagtccgaaagcaacatcagagatattttc
gacaaggcccgagcggccgctccttgcgttgttttcctcgacgagttggattccattgcc
aaggctcgtggtggctctgtcggcgacgctggcggtgcctctgaccgtgttgttaaccag
cttttgactgaaatggacggtatgacttcaaagaagaacgttttcgtcattggtgctacc
aacagacccgagcagctcgaccctgctctttgccgtcctggccgtctggattcgctcatc
tatgtgccccttcctgatgagcctggccgtcttggtattctcaaggctcagctgcgcaag
acccctgtcgccgctgatattgaccttggctacattgctgctaagacccacggcttctct
ggtgccgatttgggtttcatcacccagcgtgccgtcaagattgccatcaaggagtccatc
tcacttgacattgagcgcaccaaggcccgtgaggctgctggagacaacatggatgtcgat
gaagatgccgaggaccctgttccagagctgacaaaggctcacttcgaggaggccatgcag
atggctcgccgttccgtcagcgatgtggagatccgaagatacgaggcctttgcacagcag
atgaagaatgctggccctggtgcctacttcaagttccctgacggagctgatgctggtgct
gctggtaacgctggcaactctttcggcgatgcaggcaacgatgacgatctttacgactaa |
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