Trichoderma asperellum: 36608289
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Entry
36608289 CDS
T10296
Symbol
TrAFT101_009978
Name
(RefSeq) uncharacterized protein
KO
K10609
cullin 4
Organism
tasp Trichoderma asperellum
Pathway
tasp03420
Nucleotide excision repair
tasp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
36608289 (TrAFT101_009978)
09124 Replication and repair
03420 Nucleotide excision repair
36608289 (TrAFT101_009978)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tasp04121
]
36608289 (TrAFT101_009978)
03400 DNA repair and recombination proteins [BR:
tasp03400
]
36608289 (TrAFT101_009978)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tasp04147
]
36608289 (TrAFT101_009978)
Ubiquitin system [BR:
tasp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
36608289 (TrAFT101_009978)
DNA repair and recombination proteins [BR:
tasp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
36608289 (TrAFT101_009978)
TCR (transcription coupled repair) factors
Cul4-CSA complex
36608289 (TrAFT101_009978)
Exosome [BR:
tasp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
36608289 (TrAFT101_009978)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
36608289
NCBI-ProteinID:
XP_024761092
LinkDB
All DBs
Position
6:join(1599863..1600405,1600474..1602383,1602443..1602500)
Genome browser
AA seq
836 aa
AA seq
DB search
MQPATVDPASSSRRRPRVSSSSSPTSSPSAAKRPRFSDSLAMASVSARGRMPDIIDPTKR
QSAYQPHSGARKLVIKNLRSPVHHEARIREYYARTERELEGALDAIFNSRTPAIPLERLY
RGVEDMCRKGNADTVYKTLKDKVDSHLKNVVLPKIQSAARISNLDVLRKTLAEWKTWNAQ
TILVRSTFSYLDRTYLLLKSLPSINDMAITRFCRMAFSSQNSESSPNIGAELISAICELI
NFDRRGDNRKDSELLKDSIMMLYVLGVYTKHFEPVYLKQSEAYFREFGETCSPLSLKEYI
EACERLLEREDYRCMAYNLDSTTERQSMSLAHNILIDKYSDKLLHGGSLSNLLTDRDVRS
LKGLYDLLRLSGIQKKLKTPWSDYIRETGASIVSDKNRGDEMVIRLLDLRRALDLTIRDA
FNKDEDFLWGMREAFGKFMNDRKIADCWSSGTSKIGEMTAKHIDMLLRGGIRALPKELLS
DVKDRAAAEKAGHASSADEDAELDRQLDQALELFRFIEGKDAFEAFYKKDLARRLLMGRS
ASQDAERNMLTKLRGECGSNFTHNLEQMFKDQELAKDEMEAYKEWCEGNPDRTGKVDLQV
MILSAAAWPTYPDVRLNLPGEVATRTEQFERHYKNKHTGRVLTWKHSLAHCSVKATFPKG
AKELLVSAFQAAVLLLFNDVSADGFLAYEQISAATGLQGGDLDRTLQSLACGKARVLTKH
PKGRDVNPTDTFTFNKAFTDPKYRVKINQIQLKETKEENKATHEKIAQDRRFETQAAIVR
IMKSRKTMGHAELVAEVINLTKKRGSVEPAAIKKEIESLIEKDYLEREENSYTYLA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccagcgacagtcgacccggcttcttcctctcgccgccgtccacgcgtgtcctcg
tcctcgtcacccacgtcgtctccatcagcagccaagagaccccggttctccgatagcctg
gccatggccagcgtctcagcgaggggcaggatgcccgacatcatcgacccgacgaaacgt
cagtcggcatatcagcctcacagcggagcgcggaagcttgtcatcaagaacctacgcagt
cccgtccaccacgaagcacgaatccgggagtactatgcgcggacggagagggaacttgag
ggagcgctggacgcgatcttcaacagccggaccccggccattccgcttgagcggctctac
cgcggcgtcgaagatatgtgccgaaagggaaacgccgatacagtgtacaagacgctcaag
gacaaggtggatagccatctgaagaatgtggtcctgcccaagatacagagcgcagctagg
atatccaatctcgacgtgctgaggaaaacgctggcggaatggaagacatggaatgctcag
acgattcttgtcagatcgacctttagctatctagaccgcacatatctgctcctcaagtcc
ttaccatcaataaacgacatggctattacacggttctgccgaatggccttctcatcgcaa
aattcagaatctagcccaaatattggtgccgagcttatctccgcgatatgcgagttgatc
aacttcgatcgccggggagataatcggaaagactccgagctgctcaaagactctatcatg
atgctttatgtgctgggtgtgtacacaaaacatttcgaacccgtatacctaaagcaatcc
gaggcatactttagagagtttggagaaacctgtagccctctgagcctcaaagagtacatc
gaagcttgtgagcggctcctggagcgcgaagattaccgatgcatggcgtacaacctggac
agtacaacagagaggcagtcgatgtcgttggcgcataatatcctgattgataaatattct
gataagcttctgcatggaggaagtttgtctaatctgttaactgatcgagatgtaaggtct
ctgaagggattatatgaccttctccggctatcgggaatacaaaagaagttaaagacaccg
tggagtgattacatccgagaaacgggggcttcaatagtatctgacaagaacagaggcgat
gaaatggtgattcgcctcttggacttacggcgagcgctagacttgaccattcgcgatgca
ttcaacaaggacgaagatttcctttggggaatgcgcgaggcatttggtaaattcatgaat
gaccggaagatagccgattgctggtcttcaggcacatcgaagattggcgaaatgacggcg
aagcacatcgatatgttacttcgtggtggtataagagcccttcccaaggagcttctgtcc
gatgtcaaggatcgagctgcggcagagaaggcggggcatgccagcagcgcagatgaagac
gctgagctggacaggcagttggatcaggctctcgaactttttcgatttatcgagggcaag
gacgcctttgaggccttttacaagaaagacttggctcgtcgtcttctcatgggtcgcagt
gctagtcaagatgctgaacgaaatatgcttaccaagttgcgaggagaatgtggttctaat
ttcacccataacctggagcaaatgttcaaggaccaagagcttgctaaagatgagatggag
gcctacaaggagtggtgtgaaggcaaccctgaccgcactggcaaggtggatctgcaagtt
atgattctgtcagctgctgcatggccgacatatcccgatgtcaggctgaatctgccgggt
gaggtggctacacgcaccgaacaattcgagagacattacaaaaacaagcacacaggccga
gttttgacatggaagcactcactcgcacattgttctgtcaaggcaaccttccctaagggg
gcaaaggagctcttggtatcggcattccaggctgctgtgcttttgctcttcaacgatgtc
tctgcagacggattcctggcgtatgagcaaatctcggcggccactggcctccaggggggt
gacttggaccgaacacttcagtcgctggcctgtggaaaggcgcgtgtattgacaaagcat
ccaaaaggccgcgatgtgaatcccacggacacatttacttttaataaggcctttaccgac
cccaaatatcgtgttaagatcaaccagatccagttaaaggagaccaaggaagaaaataag
gctacgcacgagaaaatcgcccaagacaggcgctttgagacccaagcggcgattgtgcgt
atcatgaagagccgcaagacaatgggccacgcagaattggtggccgaagtcatcaatttg
accaagaagagaggcagtgtcgagccggccgctattaagaaggagatcgagagtctaatt
gagaaggattatcttgagagagaggagaactcttacacttacttggcataa
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