Trichoderma asperellum: 36608494
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Entry
36608494 CDS
T10296
Symbol
TrAFT101_006200
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tasp Trichoderma asperellum
Pathway
tasp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
36608494 (TrAFT101_006200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
36608494 (TrAFT101_006200)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
36608494 (TrAFT101_006200)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
36608494 (TrAFT101_006200)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
WKF
Nnf1
DUF7310
ZNF380_CC
Mu-like_Pro
Motif
Other DBs
NCBI-GeneID:
36608494
NCBI-ProteinID:
XP_065983793
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All DBs
Position
3:complement(join(4831416..4831476,4831544..4832057,4832138..4833224,4833310..4833564))
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AA seq
638 aa
AA seq
DB search
MAARKLQQEVDKCFKKVAEGVAEFEAIYEKIEQSNNPAQKEKQEDNLKREIKKLQRLRDQ
IKTWAASNDIKDKAPLLEHRKLIETQMEKFKAVEKAMKTKAYSQAGLSAAAKLDPKEQAK
VEACDFLNSMVDELELQIETLEAENESIQATMKKGKNKIVQENRMAEIDRIIEKHKWHQG
KLELIRRTLENGGIDTDDVTGLEEQIRYYVSDGMNEDYMDDDEIYDDLDLEEEEGVFGMN
QDNEKNSSQDTQSIQDDTHDFELPAKPRKPAKDSDSTTSTRTKSVQSKSPLPALATLHTP
LSAIGSGGSGSPAMKPASIPSRPAGEGLKYASAAAAAAAADKNNVGIAPLPPPPGVAAGI
SPLPPAQLKTSATNSPAVSFVQPAQAPEPKQATPVVAPASTSTPAPASTPAPVENAEAPS
STKATKKSKASGKQPATSEAPPSEASSATQANGSANGVKSTTEETEEESIYHLPASLQDL
VESYETSRKRPYQPLSPSTLSLMKASQLSYPSAFEADVPRTYRPDMPVPQTGSGFPTQPL
PIFDDPRLYSRIDPDTLFYVFYYKQGTAQQYLAAKALKDQSWRFHKQYQTWFQRHEEPKN
ITEEFEQGTYRFFDYESTWMNRRKADFKFAYKFLEDDI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaggaaactacaacaagaagtcgacaagtgcttcaagaaggtggcggaaggc
gtcgccgagttcgaggccatctacgaaaagattgaacagtcaaataacccggcccagaag
gagaagcaggaagacaacctcaagcgcgaaatcaagaagctgcaaagactgcgcgaccag
atcaagacatgggccgccagcaacgacatcaaggacaaggctcccttattggagcatcgc
aaactgattgagactcaaatggagaaattcaaggctgtggaaaaggccatgaagacgaaa
gcatactcccaagcgggcctctcagccgctgcgaaactagatcccaaagagcaggccaaa
gtagaagcctgcgacttcctgaatagcatggttgatgagctggagctgcagatcgagacc
ctagaagccgagaacgagtccatacaggctacgatgaagaaaggaaagaacaagatcgtt
caggagaaccgcatggccgagatcgaccggataatcgagaagcacaaatggcatcagggc
aaactggagctgattcgaaggacgctggagaatggaggcatcgataccgacgacgtcacc
ggcctagaggagcaaatccgctactatgtgtctgatggcatgaacgaggactacatggac
gacgatgaaatatacgacgatctagaccttgaggaggaggaaggtgtcttcggcatgaac
caggataacgagaagaactcgtctcaggatactcagtctatacaagacgacacccatgat
ttcgagctgccagccaaaccgaggaaaccagccaaagactccgactccaccacgtcaacg
cgaacgaaatctgtgcagtccaaatcacccttaccggcactggcaacgctgcatactccg
ctatcagcaataggtagtgggggtagcggtagtcctgccatgaagcctgcttctatcccc
tcgaggcctgcgggagagggactcaagtatgcgtctgccgcagccgcagccgcagccgca
gacaagaacaacgtcggcattgctcctctgccgccgccaccaggagttgctgccggtatc
tcgcctttaccgcctgcgcagttgaagacgagcgcaacgaattcaccggccgtctcgttt
gttcagccagctcaggcgcccgaacccaagcaagctacacctgttgttgcgcccgcatct
acttctacgcctgcgcccgcgtccacacccgcacctgtagagaacgccgaggcaccgtca
agtacgaaagcgacaaagaaatcaaaagcgtcagggaaacagccagccacatcggaagca
ccaccctccgaggcatcctctgcaacccaagcaaacggttccgccaacggtgtcaagtcc
actacggaggagaccgaagaggaatccatctatcatctccctgcgtccctacaagatctc
gttgagtcgtatgagacatcacgaaaacgaccttaccaaccattatcgccttcaaccctg
agcttgatgaaggcgagccagctgagctaccccagcgcttttgaagccgatgtcccgcga
acatatcgtcccgatatgcctgtgccgcagactggttctggattccccacacaaccgctg
cccatatttgatgaccctcggctgtactcgaggatagaccccgacactctgttttacgtt
ttttactacaagcaaggaacggcgcagcagtatttggccgccaaggcgctgaaagatcaa
agttggcggtttcacaagcagtaccaaacctggttccagcggcacgaagaacccaagaat
atcacagaggaattcgagcaaggcacctatcgcttctttgactacgagagcacatggatg
aaccggagaaaggctgattttaaatttgcttacaaatttcttgaagatgacatttag
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