KEGG   Trichoderma asperellum: 36608523
Entry
36608523          CDS       T10296                                 
Symbol
RPB10, TrAFT101_005757
Name
(RefSeq) DNA-directed RNA Polymerase II subunit L
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
tasp  Trichoderma asperellum
Pathway
tasp03020  RNA polymerase
tasp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tasp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    36608523 (RPB10)
  09124 Replication and repair
   03420 Nucleotide excision repair
    36608523 (RPB10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tasp03021]
    36608523 (RPB10)
   03400 DNA repair and recombination proteins [BR:tasp03400]
    36608523 (RPB10)
Transcription machinery [BR:tasp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     36608523 (RPB10)
  RNA polymerase III system
   RNA polymerase III
     36608523 (RPB10)
  RNA polymerase I system
   RNA polymerase I
     36608523 (RPB10)
DNA repair and recombination proteins [BR:tasp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      36608523 (RPB10)
SSDB
Motif
Pfam: RNA_pol_N Chordopox_RPO7
Other DBs
NCBI-GeneID: 36608523
NCBI-ProteinID: XP_024760254
LinkDB
Position
3:join(3512342..3512377,3512434..3512495,3512549..3512635,3512691..3512745)
AA seq 79 aa
MIIPIRCFSCGKVTGDLWERYLQLIADPRKTDGDAMDELGLKRYCCRRMIMTHVDLIEKL
LKYTPDGRNEKKQRLNESA
NT seq 240 nt   +upstreamnt  +downstreamnt
atgattattcccatccgctgcttctcttgtggaaaggtcactggcgacctttgggagcgc
tatctccagctgattgcagacccgcgcaagaccgatggcgatgccatggatgagctaggt
ctgaagcgctactgctgccgacgcatgatcatgacacacgtcgacctcatcgagaagctt
ctaaagtacactcccgacggacgcaacgaaaagaagcagagattgaacgagtcggcataa

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