Trichoderma asperellum: 36609077
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Entry
36609077 CDS
T10296
Symbol
TrAFT101_011491
Name
(RefSeq) uncharacterized protein
KO
K14324
histone deacetylase complex subunit SAP18
Organism
tasp Trichoderma asperellum
Pathway
tasp03013
Nucleocytoplasmic transport
tasp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
36609077 (TrAFT101_011491)
03015 mRNA surveillance pathway
36609077 (TrAFT101_011491)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
36609077 (TrAFT101_011491)
03036 Chromosome and associated proteins [BR:
tasp03036
]
36609077 (TrAFT101_011491)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
36609077 (TrAFT101_011491)
Chromosome and associated proteins [BR:
tasp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
36609077 (TrAFT101_011491)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
36609077
NCBI-ProteinID:
XP_024758079
LinkDB
All DBs
Position
7:complement(join(2368125..2368749,2368816..2368898))
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AA seq
235 aa
AA seq
DB search
MSISKGDEDHDAAPFLVRLFHKTGGFPRPEEFASSSLPPYVSIYTWSTCTLNELALELAA
AKPNALPNPAIGTRLSFQLVCPDLRGASATNTIQPKFAVKELGSIVIGEGYPGAEDPDDA
GPDALMRDDFGKDKTLADWRFVVGDYISCAILPPRGDGSVVPPGAARRGSISGGRDGRSG
GFRGGFHGRDSNFGRNNGRPNRPGWRDNRVPSGEWRRGEQLPDGPPGGPRGRGRW
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtctatatcaaaaggggatgaagatcatgacgcagctcccttcttagtccgtcttttc
cataaaaccggcggctttcccaggccagaggaatttgcgtcatcttctttgccgccatat
gtctcgatctacacgtggtcaacctgcacactcaatgagctggcccttgagctagcagca
gcaaaaccaaacgcattgccaaatcctgccattggcacaagactctcatttcaactcgtc
tgcccggatttacgcggcgcgagtgctactaatactatacagcccaaatttgccgtcaaa
gagctggggagcatcgtcattggcgagggctatcctggcgcagaggatcccgatgatgct
ggtcctgatgccctaatgagggatgactttgggaaagacaaaacgctggctgactggaga
tttgttgttggggactacatctcgtgcgcgatacttcctccgcggggagatggctccgta
gtaccgccaggggctgctagaagaggctcaatatctggcgggcgagatggtcgcagcggt
ggtttcagaggtggatttcatggacgagacagcaattttggccgcaacaatggccgtcct
aataggccaggctggagagataatagggttccatcaggcgaatggagaagaggagaacag
ctaccagatgggccacctggagggccaagaggcaggggccgctggtaa
DBGET
integrated database retrieval system
