Trichoderma asperellum: 36610310
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Entry
36610310 CDS
T10296
Symbol
PCN1, TrAFT101_007555
Name
(RefSeq) DNA polymerase delta processivity factor
KO
K04802
proliferating cell nuclear antigen
Organism
tasp Trichoderma asperellum
Pathway
tasp03030
DNA replication
tasp03410
Base excision repair
tasp03420
Nucleotide excision repair
tasp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
36610310 (PCN1)
03410 Base excision repair
36610310 (PCN1)
03420 Nucleotide excision repair
36610310 (PCN1)
03430 Mismatch repair
36610310 (PCN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tasp03032
]
36610310 (PCN1)
03400 DNA repair and recombination proteins [BR:
tasp03400
]
36610310 (PCN1)
DNA replication proteins [BR:
tasp03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
36610310 (PCN1)
DNA repair and recombination proteins [BR:
tasp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
36610310 (PCN1)
MMR (mismatch excision repair)
Other MMR factors
36610310 (PCN1)
TLS (translesion DNA synthesis) factors
Other TLS factors
36610310 (PCN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Rad1
Rad9
Hus1
AMA-1
DNA_pol3_beta_3
Motif
Other DBs
NCBI-GeneID:
36610310
NCBI-ProteinID:
XP_024759344
LinkDB
All DBs
Position
4:complement(join(3564767..3564784,3564858..3565147,3565206..3565635,3565694..3565735))
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AA seq
259 aa
AA seq
DB search
MLEARLEQASILKKVVDAIKDLVQDCNFDCNDSGIALQAMDNSHVALVSMMLKAEGFSPY
RCDRNIALGVNLTSLTKVLRAAQGEDMLTIKAEDAPDVLNLVFESSENDRISEYDLKLMD
IDQEHLGIPETEYAATITMPAAEFRRICTDLAAMSESVGIEASKDGVKFSCNGDIGNGSV
TLRSHTNIDKPDLNVDIELTEPVSLTFSLKYLVNFCKAAALSNQVKICLSSEVPLLVEYN
LSGSSYLRFYLAPKIGDEE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagcacggttggaacaggctagcatcctgaagaaggttgtcgatgccatcaag
gacctcgtccaggactgcaactttgactgcaatgactctggtattgctctgcaggccatg
gacaactcgcacgtcgccctcgtgtcgatgatgctcaaggccgaaggcttctctccctac
cgatgcgaccgcaacattgcccttggtgtcaacctgacgtctctgaccaaggtgctgcga
gctgcacagggcgaggacatgttgacgatcaaggctgaggatgcaccagacgttctgaac
ctggtgtttgagagcagcgagaacgaccgcatcagcgagtacgacctcaagctcatggac
attgaccaggagcaccttggcatccccgagaccgagtatgctgctactattactatgcct
gcggctgagttccggagaatctgcacagatctggctgccatgtcagagtcggttggcatc
gaggcctccaaggatggcgtcaagttctcttgcaacggtgacattggtaacggctcagtc
actctgcgaagccacaccaacattgacaagcctgatctgaatgtcgacattgagctgacg
gagcccgtttccttgaccttctctctcaagtacctggtcaacttctgcaaggctgctgcc
ttgtccaaccaggtcaagatctgcctttccagcgaggtgccgctcttggttgagtacaac
ctctctggtagcagctacctgcgtttctacctcgcaccaaagattggtgatgaggagtaa
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integrated database retrieval system
