Trichoderma asperellum: 36610514
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Entry
36610514 CDS
T10296
Symbol
RAD3, TrAFT101_011307
Name
(RefSeq) TFIIH/NER complex ATP-dependent 5'-3' DNA helicase subunit
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tasp Trichoderma asperellum
Pathway
tasp03022
Basal transcription factors
tasp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
36610514 (RAD3)
09124 Replication and repair
03420 Nucleotide excision repair
36610514 (RAD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tasp03021
]
36610514 (RAD3)
03036 Chromosome and associated proteins [BR:
tasp03036
]
36610514 (RAD3)
03400 DNA repair and recombination proteins [BR:
tasp03400
]
36610514 (RAD3)
Enzymes [BR:
tasp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
36610514 (RAD3)
Transcription machinery [BR:
tasp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
36610514 (RAD3)
Chromosome and associated proteins [BR:
tasp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
36610514 (RAD3)
DNA repair and recombination proteins [BR:
tasp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
36610514 (RAD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SNF2-rel_dom
DUF5667
nSTAND3
AAA_11
DUF365
HsdM_C
Motif
Other DBs
NCBI-GeneID:
36610514
NCBI-ProteinID:
XP_065985341
LinkDB
All DBs
Position
7:join(1717921..1717976,1718048..1718067,1718116..1718247,1718302..1718555,1718633..1718749,1718807..1719137,1719210..1719307,1719370..1720728)
Genome browser
AA seq
788 aa
AA seq
DB search
MHALAVYTYLANIPNEQYAYMCDLKKTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHMP
EKRKLIYCSRTMSEIEKALVELQSLMKYRAEQLGYEEEFRGLGLTSRKNLCLHPSVKREK
SGSVVDARCRSLTAGFVKEKKDRGENVDVCVYHDNLDLLEPHNLIPNGVWSFDALLKYGE
EHKQCPYFTARRMMQYCNVVIFSYHYLLDPKIAERVTKDFSKDCIVVFDEAHNIDNVCIE
SLSTDITEDSIRKATRSAQHLERRIAEMRETDQEQLQNEYEKLVQGLREADESRQEDAFM
ANPALPDDLLKEAVPGNIRRAEHFVAFLKRFLEYLKTRMKVRQVISETPLSFLAHLKEHT
FIERKPLRFCAERLTSLVRTLELMNIEDYQALQEVATFATLVATYEKGFLLILEPYESDT
AEVPNPTLHFTCLDAAIAIRPVFERFYSVIITSGTISPLEMYPKMLDFATVIQESYSMTL
ARRSFLPMIVTRGSDQASVSSSFQVRNEPSVVRNYGNLLTEFAKITPDGLVVFFPSYLYM
ESIISMWQGMGILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAILLCVARGKVS
EGIDFDHQYGRTVLCIGVPFQYTESRILKARLEFLRETYRIKENDFLSFDAMRHAAQCLG
RVLRGKDDYGVMVLADRRFQKKRSQLPKWINQGLSDADTNLSTDMAVSSARRFLKTMAQP
FRSKDQEGISTWGYEDLLQHQRKVEEERGDEPPPAMANSRAAANENMTTTYESDYEDIDQ
EMMELEGF
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcccttgctgtgtatacatacctagctaacatacccaacgaacaatatgcctac
atgtgtgatctgaaaaaaaccctcgatgcgggtggccattgtgtcctggaaatgccgtca
ggaaccggcaagaccgtgtcactgctatctctcattgttgcgtaccagcagcatatgccc
gagaagcgaaagctcatctattgttcacgaacaatgtcggagatcgagaaggctttagtc
gagctgcaatctctgatgaagtatcgcgccgaacagttgggctatgaagaagagtttcgc
ggccttggtctaacaagtcgaaagaacttgtgccttcatccctctgtcaaaagggaaaaa
agtggctcggttgttgatgcacgttgcagaagtttgactgcaggctttgtcaaagaaaag
aaagatcgaggtgaaaatgtggatgtctgcgtctatcacgataatcttgatctccttgaa
ccgcataacttgatacccaacggcgtatggtcatttgatgcgctcctaaagtatggagaa
gagcacaagcagtgtccatattttactgcacggcgcatgatgcaatattgtaatgttgtc
atcttctcatatcactatctcctcgatccaaagattgctgagcgtgtaacgaaagacttc
tccaaggattgtattgtagtctttgacgaagctcacaacattgacaacgtctgcatcgag
tcacttagtaccgacatcactgaagactcaatacgcaaagctactcgcagcgcacagcac
ctagagcgacgaattgctgagatgagagagaccgatcaagagcagcttcagaatgaatac
gaaaagcttgttcaagggcttcgggaagctgatgagtcaaggcaggaagatgccttcatg
gccaatccagctctgcccgatgatcttctgaaagaagctgttcctggaaatatcaggcga
gccgagcattttgtagcctttttgaaaagatttcttgaatatctcaagacgagaatgaaa
gtccgtcaagtcatctcggaaacaccattatcatttttggctcacttgaaagaacatact
ttcatcgagaggaagccgttgcgattttgtgccgaacggttaacgtcgctggtcaggacc
cttgagcttatgaatattgaagactaccaagctctccaagaagtagcaacattcgctact
ctcgttgcgacatatgagaagggtttcttgctcatattagagccatacgaatccgatacc
gccgaagtcccaaatcccactcttcactttacctgccttgacgccgccatcgccatccga
cctgtatttgaaaggttctactcggtgatcataacctctggtactatctcgccacttgaa
atgtatcctaaaatgctggatttcgctacggtaatacaagagtcatatagtatgacgctt
gcgcggagatctttccttccgatgattgtaactcgcggaagcgaccaggcttcggtctca
tccagctttcaggttcgaaatgaacccagtgttgttcgaaactacggcaatctcctcaca
gaatttgccaaaattacccctgacggcctggttgtcttcttcccgtcatatctatacatg
gaatccatcattagcatgtggcagggcatgggcattctcgacgaggtttggaagtataaa
ctgatcctggtggaaactcccgatgcgcaagaaacatcactggccctagaaacataccga
actgcctgttgcaatggaagaggagcaattctactttgcgtcgctcgcgggaaagtatca
gagggtatcgatttcgatcaccaatacggccgaaccgtgctctgtatcggcgttccgttt
cagtacacagaatcaagaatcctgaaagcaaggcttgagtttttgcgagaaacatatcgc
attaaagaaaacgatttcttgtcctttgacgccatgcgccacgctgcccagtgcctaggc
cgtgtcttgagaggcaaagacgactatggagtcatggtgctggccgatcgacgtttccag
aagaagaggagccagctacctaaatggatcaaccagggcttgtcggatgccgatacgaat
ctgagtaccgatatggcggttagtagtgctcgacgatttttgaagacaatggcgcaacca
ttccggagtaaagaccaggaaggcatcagtacctgggggtacgaagacctgttgcaacac
cagagaaaggtggaagaagaaaggggggatgaaccccctccggccatggcaaattcacga
gcagccgctaatgaaaacatgactactacgtatgaatctgattatgaagacattgatcaa
gaaatgatggagttggaaggcttctaa
DBGET
integrated database retrieval system
