KEGG   Trichoderma asperellum: 36610626
Entry
36610626          CDS       T10296                                 
Symbol
LEA1, TrAFT101_001295
Name
(RefSeq) U2 snRNP complex subunit
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
tasp  Trichoderma asperellum
Pathway
tasp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tasp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    36610626 (LEA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tasp03041]
    36610626 (LEA1)
Spliceosome [BR:tasp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    36610626 (LEA1)
 Complex B
    36610626 (LEA1)
 Complex C
   U2 SnRNP specific factors
    36610626 (LEA1)
SSDB
Motif
Pfam: LRR_9 LRR_4 LRR_8 DUF4349 DHU1_N LRR_NXF1-5 LRR_NXF2 NikA-like Isocitrate_DH_C_bact aRib
Other DBs
NCBI-GeneID: 36610626
NCBI-ProteinID: XP_024765549
LinkDB
Position
1:join(4146318..4146396,4146591..4146631,4146813..4147073,4147188..4147322,4147435..4147653)
AA seq 244 aa
MRLTAELIRDSLSYLNPLKERELDLRGHRIPAIENLGVAGPHDAIDFTDNDIQVLGNFPL
SPRITTLLLARNRVASIQPTAAAAVPNLRNLVLASNNLTELADVDALGTFTRLTQLVLAD
NPVTKKEHYRYWVIWRCPSVRFLDYEKVKQSEREKSQELFGTAEEPTALATSIMGKKSKT
FEVTSNGVAAAPSKLSRIKLTDEEKQRLQEKIKKATSLQEIIALEKELNEGRLPSGIYGD
AMEE
NT seq 735 nt   +upstreamnt  +downstreamnt
atgcggctcacggccgaactgattagggactcgctgtcctatctgaatcccctaaaggaa
agagagcttgatctccgaggacaccgaattcctgcgattgaaaacctaggtgttgcgggc
ccccacgatgccatcgacttcaccgacaacgacatccaagtgctgggcaacttccccctc
tcgccgcgcataacgacgctgctcctggcgcgcaaccgcgtcgcgagcatccagcccacg
gcggcggccgcggtgccgaacctgaggaacctggtgctggcgtcgaataacctgacggag
ctggcggacgtggatgcgctggggacgtttacgcggctgacgcagctggtgttggcggat
aaccctgttacgaagaaggagcattatcgttattgggttatctggagatgtccgtccgtt
cgatttctagactacgaaaaggtgaagcagtcggaacgagagaagagccaagaactattc
ggcacagcggaggagcctacagctctggcaacatcgattatgggcaaaaagtcaaagaca
ttcgaagtcacatccaacggcgtagcagccgcgccgtcgaagctctcgcggataaagttg
acggacgaagagaagcagaggctgcaagagaagatcaagaaggcgacgagcctgcaggag
attatcgcgctggagaaggaattgaacgagggacggttgccatctggtatttacggcgat
gctatggaggagtga

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