KEGG   Trichoderma asperellum: 36610857
Entry
36610857          CDS       T10296                                 
Symbol
RBM8A, TrAFT101_005957
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
tasp  Trichoderma asperellum
Pathway
tasp03013  Nucleocytoplasmic transport
tasp03015  mRNA surveillance pathway
tasp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tasp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    36610857 (RBM8A)
  09122 Translation
   03013 Nucleocytoplasmic transport
    36610857 (RBM8A)
   03015 mRNA surveillance pathway
    36610857 (RBM8A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tasp03019]
    36610857 (RBM8A)
   03041 Spliceosome [BR:tasp03041]
    36610857 (RBM8A)
Messenger RNA biogenesis [BR:tasp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     36610857 (RBM8A)
Spliceosome [BR:tasp03041]
 Complex C
  Other components
   EJC/TREX
    36610857 (RBM8A)
SSDB
Motif
Pfam: RRM_1 RRM_3
Other DBs
NCBI-GeneID: 36610857
NCBI-ProteinID: XP_024760473
LinkDB
Position
3:complement(join(4154085..4154300,4154366..4154599))
AA seq 149 aa
MADVDMEVDDAPPSSTRNESEMQTHTKATAVRSIEGWIIIVTNVHEEADEEALQDKFGDY
GEIKNLHLNLDRRSGYVKGYALIEYATLEEARAAIDGAHDTKLLDQTIQVDFAFVRPPPG
KGGRQGGGRAGGRRGRSRSRSPDAKSNDA
NT seq 450 nt   +upstreamnt  +downstreamnt
atggccgacgtagatatggaagtcgatgacgctccgccatcctccacgcggaacgagtcc
gaaatgcagacacataccaaggcaacggcagtccggtcaattgagggatggattatcatt
gtcacaaatgtccacgaagaggccgacgaagaagctttgcaagacaaatttggagactac
ggagagattaagaacttgcatcttaatcttgatagacgtagtggttatgtcaagggctac
gctctgatcgaatatgcgacactggaagaggctcgagcggcgatcgatggagcacacgat
acaaaattgttagatcagacgatccaagtggactttgccttcgtcagacctcctcctggc
aaaggcggcaggcaaggtggcggcagggctggtggtagaagaggtcgcagccgaagcagg
agtcctgacgccaagagcaacgatgcatga

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