Trichoderma asperellum: 36610994
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Entry
36610994 CDS
T10296
Symbol
TrAFT101_006881
Name
(RefSeq) uncharacterized protein
KO
K07466
replication factor A1
Organism
tasp Trichoderma asperellum
Pathway
tasp03030
DNA replication
tasp03420
Nucleotide excision repair
tasp03430
Mismatch repair
tasp03440
Homologous recombination
tasp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
36610994 (TrAFT101_006881)
03420 Nucleotide excision repair
36610994 (TrAFT101_006881)
03430 Mismatch repair
36610994 (TrAFT101_006881)
03440 Homologous recombination
36610994 (TrAFT101_006881)
03460 Fanconi anemia pathway
36610994 (TrAFT101_006881)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tasp03000
]
36610994 (TrAFT101_006881)
03032 DNA replication proteins [BR:
tasp03032
]
36610994 (TrAFT101_006881)
03400 DNA repair and recombination proteins [BR:
tasp03400
]
36610994 (TrAFT101_006881)
Transcription factors [BR:
tasp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
36610994 (TrAFT101_006881)
DNA replication proteins [BR:
tasp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
36610994 (TrAFT101_006881)
DNA repair and recombination proteins [BR:
tasp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
36610994 (TrAFT101_006881)
MMR (mismatch excision repair)
36610994 (TrAFT101_006881)
DSBR (double strand breaks repair)
HR (homologous recombination)
36610994 (TrAFT101_006881)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
DUF8448
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
36610994
NCBI-ProteinID:
XP_024758527
LinkDB
All DBs
Position
4:join(1424980..1425017,1425078..1425329,1425397..1426818,1426888..1426978)
Genome browser
AA seq
600 aa
AA seq
DB search
MDAESALSRGCINAIFNDPDQAAKLFPVPVMQCLQIKQMGPSGQGGDRWRLVMSDGNNYV
QTMLATAANHIIHDGKLERGCIARVKKYQPNILKGKHILIILEIEVIESLGLHDKIGNPV
VHEPKAADATIDGNDFYGAKKEEMDTKPQMQQHQPAPSRSATHAGANIYPIEALSPFSHK
WTIKARVTFKSDIKTWHKPTGEGKLFSVNLLDESGEIKATGFNDQCDAFYDLLQEGSVYY
ISTPCRVALAKKQFSNLPNDYELTFERETVIEKAEDQTNVPQLRFNFCSIQELQSVEKDS
TVDVIGVLKEVAEVSEITSKKDGRPFQKRELTLVDDTGYSVRVTVWGKTASAFDANPESV
IAFKGTKVSDFGGKSLSLLSSGTMTVNPDIPDAYRLKGWYDSAGRTDTFATHQNLAGVGG
ATGRKEEVKTISQVKDENLGVDDQAYYTIKATIVFVKQDSFCYPACSNQGCNKKVTSMPD
GTWQCEKCNVSHDRPDYRYILNLNVADHTSHQWLSCFDDTGRIIVGMSANELMELKENDD
AKFMAAFEAVNCKKLTFRCRAKMDNFGDTQRVRYQVLSASLLDYKTEGDKLVELIKQFNM
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgaatctgcactatcacggggctgcatcaatgccatctttaacgaccccgac
caggcggcgaagctctttcccgtcccggtgatgcaatgcctacagatcaaacaaatgggg
ccttcaggccaaggcggcgacagatggcgacttgtcatgagcgatggcaacaattacgtc
cagaccatgctcgctaccgcggccaatcacatcattcacgacggcaagctggagaggggc
tgcatagctcgagtgaagaagtaccagccgaatatcttgaagggaaagcacatcctgatt
attctggagattgaagttatcgagtctcttggactgcacgacaagattggtaacccggtg
gtccacgaacccaaagccgctgatgctacgatcgatggaaacgacttctacggtgctaaa
aaggaggaaatggataccaaacctcagatgcagcagcaccagccggcgccgtcacgatca
gctacacatgcgggtgccaacatttaccccatcgaggctctttcgcccttctcacacaag
tggacgataaaggcccgcgtaacattcaaatcagatatcaagacatggcataagccaacg
ggagagggaaaacttttcagcgtcaaccttcttgatgagagtggcgagattaaggctact
ggcttcaacgaccagtgcgacgccttctatgacctccttcaagagggctctgtctactac
atctctaccccctgtcgagttgcgctggcgaagaagcagtttagcaatctgccaaacgat
tatgagcttacttttgagcgagagacagtcatcgaaaaggctgaagatcagaccaacgta
ccccagctaaggttcaacttttgctctatccaagagctgcagagcgtggaaaaggatagc
accgttgatgtgattggtgtgctgaaagaagttgctgaagttagcgaaatcacatcaaag
aaggacggccggcccttccagaaacgtgaattgaccttggtggatgataccggctactcc
gtgcgtgtcaccgtttggggcaagacagcgagtgcctttgacgccaacccggagtcagtg
atcgctttcaagggcaccaaggtgtcagactttggtggcaagagcctgagccttctctcg
tcaggaaccatgaccgtcaaccccgatatccccgatgcctatcgcctcaagggctggtat
gattcagctggtcgaactgacacctttgctactcatcagaatcttgctggtgtaggtggc
gcaacaggccgaaaagaggaagtcaagacaatttcccaggtcaaagacgagaatcttggt
gtggacgaccaagcatactatacaatcaaggctaccattgtattcgtgaagcaggatagc
ttttgctaccctgcttgctccaaccagggatgcaataaaaaggtcacatctatgcccgat
ggcacatggcagtgcgaaaagtgcaatgtgtcacacgacaggcccgactaccgctacatt
ctgaacctcaacgtggctgaccacacgagccaccagtggcttagctgctttgatgatacc
ggcaggataatagtgggcatgtctgccaacgagctgatggaactcaaagagaatgacgat
gccaagttcatggcggctttcgaggcagtaaactgcaagaagctgacttttaggtgtaga
gccaagatggacaactttggcgacacccagagggtgcgataccaagtgctgagcgcgtca
ttgttggattataagacagagggcgacaaactagtagagttgatcaagcagttcaacatg
taa
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