Trichoderma asperellum: 36611414
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Entry
36611414 CDS
T10296
Symbol
SPT6, TrAFT101_004168
Name
(RefSeq) Transcription elongation factor spt6
KO
K11292
transcription elongation factor SPT6
Organism
tasp Trichoderma asperellum
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tasp03021
]
36611414 (SPT6)
03036 Chromosome and associated proteins [BR:
tasp03036
]
36611414 (SPT6)
Transcription machinery [BR:
tasp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
36611414 (SPT6)
Chromosome and associated proteins [BR:
tasp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
36611414 (SPT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
YqgF
Spt6_S1
Tex_central_region
SPT6_acidic
S1
HHH_9
SH2
HHH_3
S1_RRP5
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
36611414
NCBI-ProteinID:
XP_024766047
LinkDB
All DBs
Position
2:complement(join(5659593..5659846,5659938..5663559,5663619..5663801,5663863..5664036))
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AA seq
1410 aa
AA seq
DB search
MSSTMRDLISGEAELDDEEDDESFDEETGQERRKRPTAHVDDSSEEEEDDDDEEEARKIR
EGFIVDEDEEEEEVESDVESRPIKRKREHRNREEEEALDEEDLELIGEQFGEQPKPQAPS
KFKRLKRGHRDEDAGAHEKRGLEEIFADEDEDAGEQRSYGRPGFRSQVDEFDDFIEEDFP
EDEDERIRQQEDAEVARPRDRGVGGVVDTTGLDKDALDDMEAIFGNGEDYDWALQMEEEE
EDREREEQGIELKDVFEPSQLKEKLLTDEDNEIRFTDEPERFQLDRKSFKNLQLTAEQFK
EEARWITNQLWPKKGLAQELQAPFGKAVSKVLEFFIVDEVEVPFVFQHRKDYLLHSKKIR
KSTRDDPDGPDYTIQSDKLLNQDDLWRILELDIKFRSFVEKRNSLEKSFDNLKSMDVQDS
MVEEMIPEATTMEEIQDLQDYLQFQYANKLKDLATLAGNISLTKRPGSKSSLLDRVRNGK
AYYFVKAYGITADQLAKNALRQGRKVAPDDHEQYPMDLADTLLDDNFNTGDQVMNAARQM
YAEELFASPRMRKYLRASFYQAAEISCRRTDKGLRKIDDTHPYYEIKYIQNQAIADLVHQ
PEVFLKMMRAEEEGLVEIKLEMPSRYDFRRQLYQEFESENFSDRAEQWREERKKVLDLAY
PKLEKIVAKNIKEVIRTFCQDEVLKMCRQEFYRKLDQAPYKPKGMILGTTPRVLVLSNGG
GDPTRDPVCWAWVEEEGRVLEQGKFGNLGRDETQRENFVELVRRRRPDVIGVGGWSSDTQ
KLVRDLEGLVSEKNLMGAEFEDPETNDYRTELLEVIVVEDEVARLYKDSPRAMAEHPSLN
PITRYCIALARYMQNPMKEYAALNKDVVSLSFHPCQNLLPPDKLMKYLESAMVDTVNMVG
VNINEAMTDSYTANLLPYVAGLGPRKATSVIKTINANGGVVNTRDELVGDPDSGKLPVVG
PRVWNNCASFLYIEYDATNPSSDPLDNTRVHPEDYELGRKMAADALELDEEDVKAETDEN
GPGAIVRKLFKQDEQERVNELVLDEYADQLQRNFSQRKRATLEAISAELQAPYEELRRSF
ALLAPSDIFTMFTGETKSTLCEGMIVPVIVRMVRDDFAIVKLDCGIEGRIEGHEVSNRSS
VKDVLSSGQTVQAKILEMNYKDFMAKLSMREESLRIPYKPPINFGRDGWDYALEAADKEE
LREKDKTTGRTQRVVKHPNFKPYNSIQAEEYLGSQPPGEVIIRPSSKGNDHLAITWKVAD
GVYQHIDVLEMQKDTEFSVGKLLRIGGKYTYSDLDELIVDHVKAMARKVEEMMRHDKYQN
RSRNETEKWLITYVDANPNRSAYAFCIDTKHPGYFWLCFKASKTARVIGLPVRTIPQGFE
LRGYQYPDMRALCNGFKLRFQNEFSKMGAR
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgagctctactatgcgcgatctgatttcaggggaggccgagttggatgacgaagaagat
gacgaatcctttgacgaagaaactggccaagagcgtcgaaagagacctactgctcacgtc
gacgactccagcgaagaggaagaagatgatgacgacgaggaagaagctcgcaagatccgc
gagggcttcattgtcgacgaggacgaagaagaggaggaggtcgagtctgacgtcgaaagc
cgaccgattaagagaaagcgagagcatcggaaccgcgaggaggaagaggcactggatgaa
gaggatttagaactcattggcgagcaatttggtgaacagccaaagccccaggctccatcc
aagttcaaacgccttaagcgcggccatcgcgacgaggatgctggggctcacgaaaagcga
gggctggaagaaatcttcgccgacgaagacgaggatgctggagaacagcgttcctacggc
cgacccggcttccgttcccaagtagacgaattcgacgacttcatagaggaagactttccc
gaagatgaagatgagcgcatacgccaacaggaagatgctgaggtcgcccgccctagagac
cgcggtgttggaggtgttgtcgatactacaggactggacaaagatgctctggatgatatg
gaggctattttcggcaatggcgaagattacgactgggcgcttcagatggaagaagaagag
gaggacagagagcgagaggagcaaggcatcgaactaaaggatgtctttgagccttcgcag
ctcaaggaaaaactgctcacagatgaagataacgagatccgattcaccgacgagcccgaa
cgcttccaactggatcgtaaatcgttcaagaatctacagctgaccgcagagcaattcaag
gaggaggcccgatggatcaccaaccagctttggccgaagaagggcttggctcaagaactc
caggctccttttggcaaagctgttagcaaagtactcgagttttttattgttgatgaagtg
gaagttccatttgtgtttcaacaccgaaaagattacctcctacactccaagaagattcga
aagtcgaccagggatgaccctgacggtcccgattacacaattcagtcggataaactcttg
aaccaagatgacctatggagaatcctagagcttgacatcaaattccgctcgttcgtggag
aagagaaactcacttgagaaatcattcgacaacctcaaatctatggatgtccaagatagc
atggtcgaagaaatgatcccggaagccaccactatggaagagattcaggatctgcaggac
tatttgcaatttcaatacgctaataagctaaaggatcttgcgactttggctggaaacata
tcgctgacgaagcgtccgggttcgaaatcctcactgttggaccgtgttcgcaatggaaag
gcgtattattttgtcaaggcctacggaattactgcagatcagctagcaaagaacgctctt
cgccagggcagaaaggttgcgccagatgatcacgagcagtatccgatggatcttgccgat
actcttcttgatgacaacttcaacaccggcgatcaagtcatgaatgctgctcgccagatg
tatgccgaagagctctttgccagcccccggatgcgcaagtatctcagagcctctttttac
caggcagcagaaataagctgtcgccgtacagacaagggcttgcgaaagattgacgatacg
catccctactacgaaatcaagtacatacagaatcaagcgattgccgatctggtgcaccaa
cctgaagtgttcctaaaaatgatgcgcgccgaggaggaaggcttggtggagattaagctg
gagatgccttcacgatacgacttccggagacagctctaccaggagtttgagtcagaaaac
tttagtgatcgggcggagcagtggcgagaggagcgcaaaaaggtattggatctcgcctat
cctaagctggaaaagatcgtggccaaaaacattaaagaagtcattcgaacgttttgccag
gacgaagttctcaagatgtgtcgacaagagttctaccgcaagctggatcaagctccttac
aagcctaagggaatgatcctaggtaccactccccgagtcctagtgctgtccaacggaggt
ggtgatcccactcgcgatcctgtgtgctgggcttgggtagaggaagaaggacgtgtgctt
gaacaaggcaaatttggcaatctgggtagagacgagactcagcgtgaaaactttgtcgag
cttgtacggcgacggcgccccgatgtcattggtgttggcggttggtcgtccgatacacag
aaactcgtgcgtgacttggaaggcctcgtgagcgagaagaacctcatgggagcagagttt
gaagatcccgagacaaatgattaccgcactgagcttcttgaagtcatcgttgtggaggat
gaagtcgcgcgcctttacaaggacagcccccgtgcgatggccgaacatccttctctgaac
cccatcacaagatactgtatcgccttggcacgatacatgcaaaacccaatgaaagagtac
gctgcattgaataaagatgtagtttctctctcattccacccatgccaaaatctcctccct
ccggacaagctgatgaaatatctagagtccgccatggttgatacggtcaacatggttgga
gtcaatatcaatgaggccatgaccgactcatacacagccaacctcctcccttatgttgca
ggattgggaccgcgaaaagccaccagcgtaatcaagaccatcaatgcaaacggaggtgtg
gttaacacaagagacgagctggtgggtgatccagacagcggaaagcttcctgtcgtcggg
ccacgcgtctggaacaattgcgctagttttctatacattgagtacgacgcaaccaatccc
tcatcagatcctctagacaacactcgtgttcacccagaagattacgaactgggtcgcaag
atggcggcagatgctcttgaattggatgaagaggatgtcaaggccgaaactgatgagaat
ggacctggtgccatcgtgcggaagctcttcaagcaagatgagcaggagagagtgaacgaa
ttggtgcttgacgagtacgccgaccagctgcagaggaactttagccaacgcaagcgagct
actctagaggctatcagtgcggagttgcaagctccatatgaagaactgcgcagaagcttc
gcgctgctcgcaccttctgacattttcaccatgttcacaggcgaaaccaagtcaaccctg
tgtgaaggcatgattgttccggttattgtgcgcatggtcagagacgacttcgccatcgtg
aagctagactgcggcatcgaaggcaggatagaaggccacgaagtatcgaacagatcgtct
gtcaaggacgtacttagctcagggcaaacggtacaagccaagattctcgagatgaattac
aaggatttcatggctaagctctccatgagagaagagtctctacggatcccttataagcct
cctatcaactttggccgtgacggctgggactatgccctcgaggctgccgataaagaggag
ctccgtgagaaagacaagaccacgggcaggacccaacgagttgtcaagcatcccaacttc
aagccttacaactcaattcaagcggaggagtaccttggatcgcagcctcctggcgaggtc
atcattcgaccctcttcaaagggtaatgatcatttggccattacctggaaggttgctgat
ggcgtttaccaacacattgatgtcttggaaatgcagaaggatacagagttctccgttggc
aaacttctccggataggcggcaaatacacttacagtgatctggacgagttgattgtggac
catgttaaggccatggccaggaaagtcgaggagatgatgcggcatgataagtaccaaaac
agatcgcgcaacgagactgaaaaatggcttattacatatgtggatgccaaccccaaccga
tcagcgtacgctttctgcatcgatactaagcatcccggatacttctggctttgcttcaag
gcgagcaagacagcccgtgtaatcggcctgccagtgcgaaccattccccagggtttcgag
ctcagaggatatcaatatcccgatatgcgagccctgtgtaacggtttcaagctgcgattc
cagaatgagttttccaagatgggagcgcggtaa
DBGET
integrated database retrieval system
