Trichoderma asperellum: 36611469
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Entry
36611469 CDS
T10296
Symbol
SMD1, TrAFT101_003803
Name
(RefSeq) mRNA splicing protein smd1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
tasp Trichoderma asperellum
Pathway
tasp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
36611469 (SMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tasp03041
]
36611469 (SMD1)
03032 DNA replication proteins [BR:
tasp03032
]
36611469 (SMD1)
Spliceosome [BR:
tasp03041
]
Complex A
U1 snRNP components
Sm proteins
36611469 (SMD1)
U2 snRNP components
36611469 (SMD1)
Complex B
U1 snRNP components
36611469 (SMD1)
U4/U6.U5 tri-snRNP components
36611469 (SMD1)
Complex C
U2 snRNP components
36611469 (SMD1)
DNA replication proteins [BR:
tasp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
36611469 (SMD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
36611469
NCBI-ProteinID:
XP_024766431
LinkDB
All DBs
Position
2:join(4557833..4557846,4557970..4558019,4558103..4558401)
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AA seq
120 aa
AA seq
DB search
MKLVRFLMKCSNETVTIELKNGTIVHGTISSVSPQMNVALRTVKMTARGQDPLALDTMNI
RGSTIRYFILPDSLPLDTLLIDDAPKPKNKARKETDRGGRGGRGGRGRGGRGRGRGRGRG
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttttgatgaaatgctccaacgaaacggtgaccattgagctgaaa
aatggcaccatcgtccacggcaccatctcctcagtctctccccagatgaacgtcgccctt
cgcacggtcaagatgaccgctcgcggacaggaccctctcgcccttgataccatgaatatt
cgaggctcaacaatccgatacttcatcctccccgactccctccctctcgacaccctgttg
atcgatgatgcacccaagcctaagaacaaggcaagaaaggagacggaccgaggaggccgc
ggtggccgcggtggtcgtggcagaggaggtcgtggtcgcggccgcggccgtggacgtggt
taa
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