KEGG   Trichoderma asperellum: 36611828
Entry
36611828          CDS       T10296                                 
Symbol
MSH2, TrAFT101_003218
Name
(RefSeq) MutS-like protein
  KO
K08735  DNA mismatch repair protein MSH2
Organism
tasp  Trichoderma asperellum
Pathway
tasp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tasp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    36611828 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tasp03400]
    36611828 (MSH2)
DNA repair and recombination proteins [BR:tasp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     36611828 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_I MutS_IV AAA_27 Bap31_Bap29_C
Other DBs
NCBI-GeneID: 36611828
NCBI-ProteinID: XP_024764347
LinkDB
Position
2:join(2716111..2716134,2716212..2716343,2716397..2719018)
AA seq 925 aa
MASRPELKLDDEGGFIRFFKSLPDIGADAVRIFDRGDWYTAHGEDAMFIAKTVYKTTSVV
RQLGKNDHTGLPSVTMTMTVFRQFLREALFKLGKRVEIWQSASGRMNWKCIKQASPGNLQ
DVEDELGGQIDSAPMIMAVKISAKASEARAVGVCFADASVRELGVSEFLDNDLYSNFEAL
LIQLGVRECLIQYDKNEKERERDPELAKLRQVINNCGVALAERPAGDFGIKDIEQDLARL
LKDEKSVAMLPQTDLKLAMGSAACLIKYIGALQDPSNFGQYQLYQHDLAQYMKLDAAALK
ALNLMPGLRDGSKTMSIYGVLNHCKTPVGSRLLAQWLKQPLMSKSEIEKRQQLVEAFFTD
TELRQTMQEEHLRSVPDLYRLSKKFQRGKANLEDVVRAYQVVIRLPGFIGTLEGIMDEAY
KDPLDEAYTNKLRELSDSLGKLQEMVEQTVDLDALDRHEYIIKPEYDQSLRVIRKKLDRL
DHDIRQEFQSAARDLGQEADKKIFLEANHKVHGVCMRLTRQEAGCIRGKSKYLECSTQKN
GVYFTTKQLQAYRREYDQLSQNYNRTQSSLVNEVVQVASSYCPVLERLASVLAHLDVIVS
LSHAAVHAPDAYVRPKIHARGEGQTKLLGARHPCMELQDDVQFITNDVELTRDKSSFIII
TGPNMGGKSTYIRQAGVIALMAQVGSFVPCSEAELTIFDSILARVGASDSQLKGVSTFMA
EMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHEL
TALADQYPQVKNMHVTAHISGTNGDVNAKREVTLLYKVEPGICDQSFGIHVAELVRFPDK
VVRMAKRKADELEDFTTKHEDLGVSYSTEDVEQGSAMLKKVLVEWKEAVQNGELSKEEQV
AKLKELVAADESLLANPFFQSVKAL
NT seq 2778 nt   +upstreamnt  +downstreamnt
atggcttcaagacccgaattgaagctcgatgacgagggcggcttcatccgcttcttcaaa
tcgctaccagatatcggcgccgatgccgtgcgaatattcgacagaggtgactggtacaca
gcccacggcgaagatgccatgttcattgccaaaacagtctacaaaacaacgtctgttgtc
aggcagctcggcaaaaatgaccacacaggtctcccctccgtcacaatgaccatgacggtc
ttccgacaattcctccgcgaggcgctcttcaagctgggcaagcgggtcgaaatctggcag
agcgccagcggtcggatgaactggaagtgcatcaagcaggcgtcccctggaaacctccaa
gacgtcgaagacgagctgggcggccaaatcgattcggcgcccatgatcatggccgtcaag
atatccgcaaaggcttccgaggcgcgtgctgtcggtgtctgcttcgccgacgcgagcgtg
cgagagcttggtgtcagcgagttcctcgacaacgacctgtactccaactttgaggctctc
cttattcagcttggcgtccgagagtgcctcatccaatacgacaaaaatgaaaaagagaga
gagagggatcccgaattggcaaagttgaggcaagtcatcaacaactgcggtgttgctctg
gccgagcgtcccgcaggcgactttggcatcaaggatatcgaacaagatttggctcgcctc
ctaaaggatgaaaaatcagttgctatgctgccacagacagaccttaagttggccatgggc
tctgcggcatgcctgattaaatacattggcgctctgcaggatccctccaactttggccaa
tatcagctgtaccagcacgatttggcccaatacatgaagctggacgctgcggctctaaag
gccctcaacctcatgcctggtctgcgagacggatcaaagacaatgagcatctacggcgtg
ctcaatcactgcaagactcctgtaggcagtcgcctcttggcacagtggctaaagcagccg
ctgatgagcaaaagtgaaatcgagaagcgacagcagcttgtcgaggctttctttactgat
actgagctccgtcagactatgcaggaagagcatttacgctctgttcctgacctctaccgc
ttgtcgaagaaattccaacgcggcaaagctaatctggaggatgtcgtccgtgcctaccag
gtcgttatccgccttcctggcttcatcgggactctcgagggaatcatggatgaggcttac
aaagatcctctggatgaagcgtataccaacaagctccgagagctgtccgatagtctcggc
aagcttcaggagatggttgaacaaactgttgatctcgacgctctagaccgacatgagtat
ataatcaagcccgaatatgatcaaagcctgcgtgttatccgcaagaagctcgatcgactc
gaccatgacattaggcaagaattccagagcgccgcacgcgacttgggtcaggaggccgac
aagaagatcttcctcgaagcgaaccacaaggtccacggcgtgtgcatgcgtctgaccaga
caagaagctggctgcattcgtggcaagtcaaaatatcttgaatgttccactcagaagaac
ggtgtctacttcactacgaagcagctacaagcctatcgtcgtgaatatgaccagctgtct
caaaactacaatcgcactcagagcagtttggtaaacgaggtcgtccaggtagcgtcctcg
tattgcccggtccttgagcgtctcgccagcgtgcttgcccacctagatgtcatcgtatcg
ctctctcacgctgccgtccacgctccagatgcctacgtccgacccaagatacatgcccgc
ggtgagggtcagactaaactcttgggtgctcgtcacccctgtatggaactccaggatgac
gtgcaattcatcaccaacgatgttgagctcacccgagataagtcctcattcatcatcatc
actggacccaacatgggcggtaaatctacctacatccgtcaagctggcgttattgccctt
atggcccaggttgggtccttcgtcccctgttcagaggctgagctcaccattttcgactct
atcctcgcccgagtcggcgcttctgattcacagctcaagggtgtatccactttcatggca
gaaatgcttgagactgccaatattctcaagtcagcgacggcagagtccctcatcatcatc
gacgagcttggacgtggtacttcgacatacgatggttttggcctcgcttgggccatctct
gagcacattgtcaaggagattggctgctttgccatgtttgcgactcacttccacgagctt
actgctctggccgatcagtaccctcaggtcaagaacatgcacgttacagcacatatcagc
ggcaccaatggcgatgtcaacgccaagcgtgaggtcacgctgctgtacaaggttgagccg
ggcatttgtgatcagagtttcggcatccacgtcgccgagctggtacgattcccagataag
gttgttcgcatggcaaaacgcaaggcggacgagctggaagattttactaccaagcatgaa
gaccttggcgttagctacagtaccgaggatgttgaacaaggcagtgcgatgttgaagaag
gttctcgtcgaatggaaagaggccgtgcagaatggagagttgagcaaagaagagcaagtg
gctaagctgaaggagttggtggcggcagatgagagtctcctggccaaccctttctttcaa
tcggtcaaggcactataa

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