Trichoderma asperellum: 36611828
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Entry
36611828 CDS
T10296
Symbol
MSH2, TrAFT101_003218
Name
(RefSeq) MutS-like protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
tasp Trichoderma asperellum
Pathway
tasp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
36611828 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tasp03400
]
36611828 (MSH2)
DNA repair and recombination proteins [BR:
tasp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
36611828 (MSH2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
36611828
NCBI-ProteinID:
XP_024764347
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All DBs
Position
2:join(2716111..2716134,2716212..2716343,2716397..2719018)
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AA seq
925 aa
AA seq
DB search
MASRPELKLDDEGGFIRFFKSLPDIGADAVRIFDRGDWYTAHGEDAMFIAKTVYKTTSVV
RQLGKNDHTGLPSVTMTMTVFRQFLREALFKLGKRVEIWQSASGRMNWKCIKQASPGNLQ
DVEDELGGQIDSAPMIMAVKISAKASEARAVGVCFADASVRELGVSEFLDNDLYSNFEAL
LIQLGVRECLIQYDKNEKERERDPELAKLRQVINNCGVALAERPAGDFGIKDIEQDLARL
LKDEKSVAMLPQTDLKLAMGSAACLIKYIGALQDPSNFGQYQLYQHDLAQYMKLDAAALK
ALNLMPGLRDGSKTMSIYGVLNHCKTPVGSRLLAQWLKQPLMSKSEIEKRQQLVEAFFTD
TELRQTMQEEHLRSVPDLYRLSKKFQRGKANLEDVVRAYQVVIRLPGFIGTLEGIMDEAY
KDPLDEAYTNKLRELSDSLGKLQEMVEQTVDLDALDRHEYIIKPEYDQSLRVIRKKLDRL
DHDIRQEFQSAARDLGQEADKKIFLEANHKVHGVCMRLTRQEAGCIRGKSKYLECSTQKN
GVYFTTKQLQAYRREYDQLSQNYNRTQSSLVNEVVQVASSYCPVLERLASVLAHLDVIVS
LSHAAVHAPDAYVRPKIHARGEGQTKLLGARHPCMELQDDVQFITNDVELTRDKSSFIII
TGPNMGGKSTYIRQAGVIALMAQVGSFVPCSEAELTIFDSILARVGASDSQLKGVSTFMA
EMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHEL
TALADQYPQVKNMHVTAHISGTNGDVNAKREVTLLYKVEPGICDQSFGIHVAELVRFPDK
VVRMAKRKADELEDFTTKHEDLGVSYSTEDVEQGSAMLKKVLVEWKEAVQNGELSKEEQV
AKLKELVAADESLLANPFFQSVKAL
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagacccgaattgaagctcgatgacgagggcggcttcatccgcttcttcaaa
tcgctaccagatatcggcgccgatgccgtgcgaatattcgacagaggtgactggtacaca
gcccacggcgaagatgccatgttcattgccaaaacagtctacaaaacaacgtctgttgtc
aggcagctcggcaaaaatgaccacacaggtctcccctccgtcacaatgaccatgacggtc
ttccgacaattcctccgcgaggcgctcttcaagctgggcaagcgggtcgaaatctggcag
agcgccagcggtcggatgaactggaagtgcatcaagcaggcgtcccctggaaacctccaa
gacgtcgaagacgagctgggcggccaaatcgattcggcgcccatgatcatggccgtcaag
atatccgcaaaggcttccgaggcgcgtgctgtcggtgtctgcttcgccgacgcgagcgtg
cgagagcttggtgtcagcgagttcctcgacaacgacctgtactccaactttgaggctctc
cttattcagcttggcgtccgagagtgcctcatccaatacgacaaaaatgaaaaagagaga
gagagggatcccgaattggcaaagttgaggcaagtcatcaacaactgcggtgttgctctg
gccgagcgtcccgcaggcgactttggcatcaaggatatcgaacaagatttggctcgcctc
ctaaaggatgaaaaatcagttgctatgctgccacagacagaccttaagttggccatgggc
tctgcggcatgcctgattaaatacattggcgctctgcaggatccctccaactttggccaa
tatcagctgtaccagcacgatttggcccaatacatgaagctggacgctgcggctctaaag
gccctcaacctcatgcctggtctgcgagacggatcaaagacaatgagcatctacggcgtg
ctcaatcactgcaagactcctgtaggcagtcgcctcttggcacagtggctaaagcagccg
ctgatgagcaaaagtgaaatcgagaagcgacagcagcttgtcgaggctttctttactgat
actgagctccgtcagactatgcaggaagagcatttacgctctgttcctgacctctaccgc
ttgtcgaagaaattccaacgcggcaaagctaatctggaggatgtcgtccgtgcctaccag
gtcgttatccgccttcctggcttcatcgggactctcgagggaatcatggatgaggcttac
aaagatcctctggatgaagcgtataccaacaagctccgagagctgtccgatagtctcggc
aagcttcaggagatggttgaacaaactgttgatctcgacgctctagaccgacatgagtat
ataatcaagcccgaatatgatcaaagcctgcgtgttatccgcaagaagctcgatcgactc
gaccatgacattaggcaagaattccagagcgccgcacgcgacttgggtcaggaggccgac
aagaagatcttcctcgaagcgaaccacaaggtccacggcgtgtgcatgcgtctgaccaga
caagaagctggctgcattcgtggcaagtcaaaatatcttgaatgttccactcagaagaac
ggtgtctacttcactacgaagcagctacaagcctatcgtcgtgaatatgaccagctgtct
caaaactacaatcgcactcagagcagtttggtaaacgaggtcgtccaggtagcgtcctcg
tattgcccggtccttgagcgtctcgccagcgtgcttgcccacctagatgtcatcgtatcg
ctctctcacgctgccgtccacgctccagatgcctacgtccgacccaagatacatgcccgc
ggtgagggtcagactaaactcttgggtgctcgtcacccctgtatggaactccaggatgac
gtgcaattcatcaccaacgatgttgagctcacccgagataagtcctcattcatcatcatc
actggacccaacatgggcggtaaatctacctacatccgtcaagctggcgttattgccctt
atggcccaggttgggtccttcgtcccctgttcagaggctgagctcaccattttcgactct
atcctcgcccgagtcggcgcttctgattcacagctcaagggtgtatccactttcatggca
gaaatgcttgagactgccaatattctcaagtcagcgacggcagagtccctcatcatcatc
gacgagcttggacgtggtacttcgacatacgatggttttggcctcgcttgggccatctct
gagcacattgtcaaggagattggctgctttgccatgtttgcgactcacttccacgagctt
actgctctggccgatcagtaccctcaggtcaagaacatgcacgttacagcacatatcagc
ggcaccaatggcgatgtcaacgccaagcgtgaggtcacgctgctgtacaaggttgagccg
ggcatttgtgatcagagtttcggcatccacgtcgccgagctggtacgattcccagataag
gttgttcgcatggcaaaacgcaaggcggacgagctggaagattttactaccaagcatgaa
gaccttggcgttagctacagtaccgaggatgttgaacaaggcagtgcgatgttgaagaag
gttctcgtcgaatggaaagaggccgtgcagaatggagagttgagcaaagaagagcaagtg
gctaagctgaaggagttggtggcggcagatgagagtctcctggccaaccctttctttcaa
tcggtcaaggcactataa
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