Trichoderma asperellum: 36611842
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Entry
36611842 CDS
T10296
Symbol
DBP2, TrAFT101_011701
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tasp Trichoderma asperellum
Pathway
tasp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
36611842 (DBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tasp03041
]
36611842 (DBP2)
03009 Ribosome biogenesis [BR:
tasp03009
]
36611842 (DBP2)
Enzymes [BR:
tasp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
36611842 (DBP2)
Spliceosome [BR:
tasp03041
]
Complex A
U1 snRNP components
U1 related factors
36611842 (DBP2)
Complex B
36611842 (DBP2)
Ribosome biogenesis [BR:
tasp03009
]
Eukaryotic type
Pre-60S particles
Helicases
36611842 (DBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Rod_N
Helicase_C_2
Utp25_C
P-loop_SecA
Glyoxalase_3
FtsK_SpoIIIE
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
36611842
NCBI-ProteinID:
XP_065985481
LinkDB
All DBs
Position
7:join(2960590..2960717,2960901..2961055,2961160..2962128,2962203..2962310,2962820..2962948,2963026..2963186)
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AA seq
549 aa
AA seq
DB search
MSGYGGGRSNGGGYGGGGGGYGRDRGDRGGDRNGHGGGGFGGGRGGYGNGHGGYGGGGYG
GGGGGGGGGYGGGYGGGGGDRMGHLGAGLQRQEWDLSALPKFEKDFYKESPDVAARDAAE
VDAFRRKHQMTIAGSGVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGR
DVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGR
SSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADR
MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRALAADFLQDFIQVNIGSMELAANHR
ITQIVEVVTEMEKRDRMIKHLEKVMENKENKILIFVGTKRIADEITRFLRQDGWPALSIH
GDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRT
GRAGQNGTAITLFTTDNQKQARDLVNVLQEAKQQIDPRLAEMTRYGGGGGRGYGGYRGRG
GGRGGYRRW
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctacggcggcggtcgatccaacggcggcggttacggaggcggtggtggtggt
tacggtcgtgatcgtggtgatcgcggcggcgaccgcaacggccatggaggcggtggattt
ggcggaggtcgtggtggatacggcaatggccacggcggatacggcggtggtggctatggt
ggaggaggtggtggtggtggtggtggctacggcggcggttacggcggcggtggtggtgac
cgaatgggccacctcggcgctggcctgcaacgacaagaatgggacctttccgcccttcct
aagttcgaaaaggacttctacaaggagtctcctgatgtcgccgcccgcgacgctgccgaa
gtcgatgcgttccgtcgcaaacatcagatgaccattgccggctcaggagttcccaagccc
gtcgagacctttgacgaggctggattccctcgctacgtcatggatgaggtcaaggctcag
ggcttccctgctcctaccgccattcagtctcaaggatggcccatggctctttctggacgt
gatgtcgtcggtattgccgagaccggttccggaaagactcttacatactgtcttcccgcc
attgttcacatcaacgctcagcccctccttgcccctggtgacggccctatcgtcctgatc
ctggcccccactcgtgagcttgctgtccagattcagcaggaaatctcaaagttcggtcgc
tcatcacgtatccgcaacacctgtgtctacggtggtgtccccaagggcccccagattcgc
gatctctcccgtggtgttgaggtttgcattgccacccctggccgtctcatcgacatgctc
gaggccggcaagaccaaccttcgtcgtgtaacctacttagttctcgacgaggctgatcgc
atgctggacatgggtttcgagcctcaaattcgcaagattatcgagcaaattcgacctgac
cgacagactctcatgtggtccgctacatggcccaaggaagtccgtgctcttgctgccgat
ttcttacaagacttcatccaggtcaacatcggttccatggaactggctgccaaccacaga
atcacccagattgtggaggttgttaccgaaatggagaagagagaccgcatgattaagcat
cttgagaaggtcatggagaacaaggagaacaagatcctcatctttgttggcaccaagcgt
attgcggacgagatcacccgattccttcgccaggacggctggcccgctctctcaattcac
ggagacaagcaacaaaacgagcgagactgggtcctcgaccagttcaagaccggaaagagc
cctatcatggttgctaccgacgtggcatcccgtggtatcgatgttcgcaacatcacccat
gtgttgaactacgattaccctaacaactcggaggattatatccatcgtattggtcgtacc
ggccgtgctggccagaacggaactgccattacgctcttcaccactgacaaccagaagcag
gcccgtgatcttgtcaatgtgctccaggaggccaagcaacagatcgatcctcgtctggct
gagatgacccgctacggtggtggtggcggccgcggctacggcggttaccgtggccgtgga
ggcggtagaggtgggtatcgtcgatggtaa
DBGET
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