Trichoderma asperellum: 36611961
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Entry
36611961 CDS
T10296
Symbol
FIP1, TrAFT101_002029
Name
(RefSeq) cleavage polyadenylation factor subunit fip1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tasp Trichoderma asperellum
Pathway
tasp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
36611961 (FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
36611961 (FIP1)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
36611961 (FIP1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
36611961
NCBI-ProteinID:
XP_024763146
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All DBs
Position
1:join(6430713..6430862,6430930..6430982,6431077..6431318,6431373..6431914)
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AA seq
328 aa
AA seq
DB search
MDMDEDDDLYQPEEPKIEQDEEKKLKAEELEEGEEEDESGAMDEDDDDDSDIDIITERKD
GTKAAPPPQAKYSDIRNIPQRSASNDISAKSTAPVKRDEDSKATNALSIAAPSADQTSAA
ASKSTIDINAIPIHPATGKPITQINIDEDLPDSDKPWRKPGTDISDYFNYGFDEFTWALY
AAKQESIRGEFGADAFAVNNKKMMEDFNMMMMGGMGMQGGGGAGAGGAGGGGAAAGMPGM
DGIPPEMQAMMQQMMASGMDPSQMDPSQMAAMFSGMQNAGGNAGAQGSQGQNFGGGFGGN
QGFGYDQGMAGGGGGRGGFGGRGRRGRW
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggacatggacgaagatgacgatctctaccagccagaagagccaaagattgaacaagat
gaggagaaaaagctcaaggcagaagagctagaggaaggcgaagaggaagatgagagcggc
gccatggacgaagatgatgatgacgattcggatatagacatcatcacagagcgaaaagat
ggcacaaaggcagcgccgccgccacaagcaaaatatagcgacattagaaatattccccaa
cgatcagcctccaacgacatctccgcaaagtcaacggcgccggtcaagagagatgaagac
tcgaaagcgacgaacgctctgagcattgccgccccaagcgcagatcaaacctcagctgcc
gcctcgaagtccacaattgatatcaatgctattccaattcaccctgcgactggcaagcct
ataacacaaataaacattgatgaggatctgccagatagcgataaaccgtggcgcaagcca
ggcacagacattagcgattacttcaactacggcttcgacgaattcacatgggcgctatat
gctgccaagcaagaatctatccgtggcgaatttggcgccgatgcctttgctgtcaacaac
aagaagatgatggaggacttcaacatgatgatgatgggaggtatgggcatgcaaggtgga
ggaggtgctggggctggcggggctggcggcggaggtgccgctgctggcatgcctggtatg
gatggaatcccgcccgaaatgcaagccatgatgcagcagatgatggcctctggcatggat
ccttcccagatggacccaagccagatggcagccatgttctctgggatgcaaaatgccggc
ggcaacgcgggtgcccagggaagccagggtcaaaactttggtggaggctttggtggaaac
caaggcttcggctatgatcaaggcatggctggaggtggcggtggaagaggcggatttggg
ggccgtggacgccgtggccgatggtag
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