Trichoderma asperellum: 36612197
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Entry
36612197 CDS
T10296
Symbol
TrAFT101_007324
Name
(RefSeq) uncharacterized protein
KO
K12881
THO complex subunit 4
Organism
tasp Trichoderma asperellum
Pathway
tasp03013
Nucleocytoplasmic transport
tasp03015
mRNA surveillance pathway
tasp03040
Spliceosome
Brite
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
36612197 (TrAFT101_007324)
TREX complex
36612197 (TrAFT101_007324)
Spliceosome [BR:
tasp03041
]
Complex C
Other components
EJC/TREX
36612197 (TrAFT101_007324)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
36612197 (TrAFT101_007324)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_PARP14_3
RRM_occluded
RBD_DEAH11
YBL010C_LAA2
Motif
Other DBs
NCBI-GeneID:
36612197
NCBI-ProteinID:
XP_024756481
LinkDB
All DBs
Position
4:join(2786067..2786297,2786360..2786389,2787186..2787350,2787412..2787485,2787541..2787808,2787862..2787864)
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AA seq
256 aa
AA seq
DB search
MSTKLDKPLDEIVTAQRRNSVRRRSLRRTTTGRPPATAPAGGVQKTAARANRGAASKATP
AKAAIAHGDSKVIVSNLPKDVTEKQIKEYFVQSVGPIKRVELSYGPNSQSRGIANVTFSK
PDGASRALQSLNGLLVDGRPIKIEIVVGAAQADKVIPPVKSLAERATQPKSQPRSAAGKK
QNAAATKATGAKGAAAANANKKRRGRNARPAKKTAEELDSDMADYFVNANNNDAAGGAAP
AAAPANGDAPMEDEIM
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccaagctcgacaagcctcttgacgagatcgtcaccgcccagcgccgcaactct
gtccgccgtcgctctctgcgacgcacgacgactggccgccctcctgctaccgcccctgcc
ggcggtgttcaaaagacggccgcaagggctaaccgtggtgctgcctcaaaggccactccc
gccaaagctgccattgcccacggcgatagcaaagtcatcgtcagcaatttgcccaaggac
gtgacggagaagcagatcaaggaatactttgttcaatctgtcggccccatcaagagggtt
gagctctcctacggccccaactcccagagccgaggcatcgccaatgttacctttagcaag
cctgacggtgcctcaagggcactacagtctctcaacggattattggtagatggccgcccc
atcaagattgaaattgttgttggcgctgctcaagccgataaggtcattcctccggtgaag
agcctggctgagcgtgcaactcaacccaaatctcaacccaggtctgctgctggcaagaag
cagaatgctgctgcaaccaaggccaccggcgccaagggagctgctgctgctaatgccaac
aagaagcgacgcggccgcaacgctcgcccggccaagaagacggccgaggagctcgactca
gacatggccgattactttgttaatgccaacaacaatgatgctgctggtggcgccgctcct
gccgctgctcctgccaacggagacgctcccatggaggatgagattatgtaa
DBGET
integrated database retrieval system
