Trichoderma asperellum: 36612304
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Entry
36612304 CDS
T10296
Symbol
MTR3, TrAFT101_005170
Name
(RefSeq) 3'-5'-exoribonuclease
KO
K12587
exosome complex component MTR3
Organism
tasp Trichoderma asperellum
Pathway
tasp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
36612304 (MTR3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
36612304 (MTR3)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
36612304 (MTR3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
36612304
NCBI-ProteinID:
XP_024759462
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Position
3:join(1738198..1738318,1738397..1739136)
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AA seq
286 aa
AA seq
DB search
MADRRRVNGPGSSTLPPVYDDGELDAALRRQRAPDAIRPLYLKTGVTPSASGSAYLEIEP
REGEHGSGMKLTCTVHGPRSLPRSAPFSPYMVLSTHVKFAPFATKQRRGYLRDSSEKDLS
THLETALRGALIADRWPKSGVDVVVTIIEGESTRQDAVERRVEEWDVMNVLGGCITVASA
AIADAGIDCVDTVSGGVAALVASKNGKDASIVLDPVALEHESILAACCVAYLPNRDEVTN
LWFKGQLPSPASCNHQSLVSRAVQASRGTHGLISASLSEAIGSTQN
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgaagacgagtaaatgggcccgggagctctactttacctccagtttatgac
gatggcgaattagatgcggctttgcgccgccagcgagcacctgatgccatccggcctctc
tacctcaagacaggggtgactccctcagcatctggctccgcctatctggagattgagcct
cgagaaggggaacatggctcgggcatgaaattgacgtgtaccgtccatggacccaggtcg
cttccacgctctgctcccttctctccttacatggtgctctcaactcatgtcaagttcgct
ccatttgccacgaaacagcgtagaggctatcttcgtgactcgagcgaaaaggacctcagc
acacacctagaaacggcccttcgcggagctctgattgctgaccggtggcccaagagtggc
gtcgacgtcgtcgtcacaattatcgaaggggaatcaactcggcaagacgcggtggagcgg
cgagtcgaggaatgggatgtgatgaacgttctaggcggatgcatcactgttgcctctgcg
gccattgccgatgcaggcattgactgcgtggacaccgtttctggaggagtggctgccctg
gtggcgagcaagaatggcaaagatgcctcaattgtgctggatcctgtggcgctggagcat
gaatctattctggcagcctgctgtgtggcatatctgcccaacagagatgaagttacaaat
ctctggttcaagggccagctaccctcgcctgcttcatgcaatcaccaatcactagtttca
agggcggtacaggcgagcaggggcacacatgggttgatttcggcgtctttaagcgaagct
atcggcagcactcaaaactaa
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