KEGG   Trichoderma asperellum: 36612556
Entry
36612556          CDS       T10296                                 
Symbol
TrAFT101_011808
Name
(RefSeq) uncharacterized protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
tasp  Trichoderma asperellum
Pathway
tasp03040  Spliceosome
tasp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tasp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    36612556 (TrAFT101_011808)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    36612556 (TrAFT101_011808)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tasp03041]
    36612556 (TrAFT101_011808)
   04121 Ubiquitin system [BR:tasp04121]
    36612556 (TrAFT101_011808)
   03400 DNA repair and recombination proteins [BR:tasp03400]
    36612556 (TrAFT101_011808)
Enzymes [BR:tasp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     36612556 (TrAFT101_011808)
Spliceosome [BR:tasp03041]
 Complex B
  Other components
   Prp19 complex
    36612556 (TrAFT101_011808)
 Complex C
   Prp19-CDC5 complex
    36612556 (TrAFT101_011808)
Ubiquitin system [BR:tasp04121]
 Ubiquitin ligases (E3)
  U-box type E3
   36612556 (TrAFT101_011808)
DNA repair and recombination proteins [BR:tasp03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    36612556 (TrAFT101_011808)
SSDB
Motif
Pfam: WD40_Prp19 Prp19 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_IFT140_1st B-prop_COPA_B_2nd Beta-prop_Aladin WD40_Gbeta Beta-prop_NOL10_N Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_HPS5 V_ATPase_I_N PEP5_VPS11_N zf-Nse HTH_SUN2 NBCH_WD40
Other DBs
NCBI-GeneID: 36612556
NCBI-ProteinID: XP_024757764
LinkDB
Position
7:complement(join(3314747..3315222,3315369..3315826,3315885..3316320,3316385..3316429,3316540..3316552))
AA seq 475 aa
MLCGISGEAPQEPVASKKSGVVYEKRLIEQYISEHGAEPNGEVITAEDLLPIKSSRIPRP
RPPTLTSIPALLATFQNEWDNLALETYNLREQLARTREELATALYQHDAAVRVIARLTKE
RDEARDSLSRVTVTDGAAAGEEMVVDSVELLPEELAAQVDQTHQSLSKSRKKRPVPEGWV
STDEVSSFEPTTISSLPVPQATSLDLEGSYAVAGGLSGEAAIYSIEADNVERTVPVNEPV
TDTLWSGSKVFFATSQGNIKVYEAGNEIGTLSEHAGAASGLSLHPSGDLLASVGIDKSIV
FYHLETMKRVSRAYADASLTTCAFHPDGHLFAAGTVNGDVKLYMTKTLEQAVVFKLGAPV
QALVFSENGFMLAATAKGQTSVTIFDLRKEGDAAVSKVLETGGSVQSLAWDYTGQFLATG
GATGITVQQYTKSSKKWSEPLRNSVAAIAVRWGESGKKLVSLNGEGVVSVLGVKN
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgctttgcggaatctccggagaagctccacaagagcctgtcgcgtccaagaagtcgggc
gtcgtatacgagaagcggctcatagaacagtacatcagcgaacatggcgcagaacccaac
ggcgaagttataacagcagaggacctgctgcctatcaagtcttctcgcatccctcgacct
cggccccctaccctgacgtcgattcctgcactccttgcgacattccaaaacgaatgggac
aatcttgccctggagacgtacaacctgagagagcagctagcacggacgagagaagagctc
gccacggcgttgtatcagcacgatgccgccgttcgtgtcatcgcccggttgacaaaagag
agggatgaggccagagattcattgagccgagttactgtaacagacggtgctgcggctggc
gaggaaatggttgtggatagcgttgagctactaccagaagagctggcagcacaggtggac
cagacacatcaaagcctatccaagagccgcaagaagcgccccgtgccggaaggctgggtt
tccaccgacgaggtgtcatcatttgagccaacaacgatcagctcgttacctgtcccacaa
gccacgtcactggatctcgagggtagctatgcggtggcaggtggattgagcggcgaggcg
gccatctattctattgaggcggataacgtggagaggaccgtgcccgtcaatgaacctgta
acggacactctctggtctgggtcaaaggtcttctttgcgaccagccagggaaacatcaaa
gtctacgaggcaggcaacgagattggcaccctatcagagcacgctggagctgccagtggc
ctgagcttacatccttctggggacctgcttgcgtctgtgggcattgataagagcatcgta
ttctaccacctggagacgatgaagcgagtttctcgagcctacgccgatgcttctttgacc
acatgcgcgttccaccctgatggacacttgtttgccgcgggcactgtcaacggtgatgtc
aagctatatatgaccaagacgctcgagcaggctgtggtattcaagctcggtgcgccggtt
caggccctcgtcttttccgagaacggcttcatgctcgcggccacagccaagggacagact
agcgttaccattttcgacctgcgcaaagagggagacgcggcggtttccaaggtgctcgag
acaggaggctcagtacagtcgctggcttgggactatacgggccagttcttggcgactggt
ggagcgacgggcatcaccgtccagcagtacacaaagtcgagcaagaagtggagcgagccg
ctgcggaactctgtggctgccattgccgttcgatggggcgagtcgggcaagaagctggtt
tctctcaacggggagggtgtggtgagcgtgcttggtgtgaagaactaa

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