Trichoderma asperellum: 36612778
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Entry
36612778 CDS
T10296
Symbol
TrAFT101_007173
Name
(RefSeq) uncharacterized protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
tasp Trichoderma asperellum
Pathway
tasp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
36612778 (TrAFT101_007173)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tasp03041
]
36612778 (TrAFT101_007173)
Enzymes [BR:
tasp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
36612778 (TrAFT101_007173)
Spliceosome [BR:
tasp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
36612778 (TrAFT101_007173)
Complex C
U5 SnRNP specific factors
36612778 (TrAFT101_007173)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
BRR2_plug
ResIII
Helicase_C
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
36612778
NCBI-ProteinID:
XP_024756647
LinkDB
All DBs
Position
4:join(2289677..2295747,2295829..2296366)
Genome browser
AA seq
2202 aa
AA seq
DB search
MSDPHRDVSQYKYSAMSNLVLQADRRFVTRRTDEATGDPESLAGRLSINDMGSRVARDEA
PKQKKQPGMPDIERGSLQEGQDVLLREQRKRKPDAQQAGVLGANDALIEGITYRPRTAAT
RATFDLILTLVANNLGDVPHDVVRSAADAALEYLKDDDMKDLDKKKEIDDILGTTLSPKQ
FNELINLGKKITDYDAQDEDEDVDMRDNNDDDAEIDERQGVAVAFDEDDEEDEIVNEVRD
ESSEDEEEEEEGEGTTKAEEDAAEADDDMILDSAPVDSKHKKSEKPSILARDIDAFWLQR
QIGLLYPDAHEQADKTKEALRVLSGEPDEVGGEEKSLREIENDLMELFDFEHHELVQKLV
ENREKVFWLTKLARAADAEQRANVEREMVSEGLQWILNELRGKSGTDGDKAGKGGIKMDI
DVPASFTAEAPKTERLEGQLVGGLQPKRLINLDNLVFDQGNHLMTNPKVRLPEGSTKRSF
KGYEEIHVPPPKKRNDPDDILIPITDMPEWSRLPFSTSKSLNKIQSKTYPTAFEDDGNML
VCAPTGSGKTNVAMLTILREIGKNRNPETGEIDLDAFKIVYIAPLKALVQEQVGNFGKRL
EPYGIRVSELTGDRQLTKQQISETQIIVTTPEKWDVITRKATDLTYTNLVRLIIIDEIHL
LHDDRGPVLESIVSRTIRKTEQTGEPVRIVGLSATLPNYRDVASFLRVDTKKAMFHFDGS
YRPCPLRQEFIGVTDRKAIKQLKTMNDVTYNKVIEHVGTHRNQMIIFVHSRKETAKTAKY
IRDKALEMETINQILRHDAGSREVLAEAASQATDQDLKDILPYGFGIHHAGMNRIDRTDV
EDLFARGAIQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEKGSWVELSPQDVLQMLGRAG
RPQFDTYGEGIIITTQSEIQYYLSLLNQQLPIESQFVSKLVDNLNAEVVLGNVRTRDEGV
EWLGYTYLFVRMLRSPGLYQVGAEYEDDEALEQKRVDLIHSAAMALRKSNLVKYDEKTGR
IQSTELGRIASHYYITSSSMDTYNNLIQPSITTIELFRVFALSDEFKYIPVRQDEKLELA
KLMGRVPIPVKESIEESHAKINVLLQAYISRLKLDGLALMADMVYVTQSAGRILRAIFEI
TLKKGWASVAKTALDLCKMAEKRMWPTMSPLRQFPSCPRDIVQKAERIDVSWSSYFDLDP
PRMGELLGMPKAGRTVCGLVAKFPRVDVQAQVQPMTRSMLRVELSITPNFEWDDSVHGAA
ESFWIIVEDCDGEDILYHDTFLLRKDYAESEANEHIVDFTVPITDPMPPNYFVSVISDRW
MHSETRLAVPFHKLILPEKFPPHTELLDLQPLLVSALKIQDYVNLYPDWRQFNKIQTQTF
NSLYKTDQNVFIGAPAGSGKTVCAEFALLRHWSQGDDAGRAVYIAPFQELVDARLQDWQK
RLSHLGGGKEIVKLTGETAADLKLLEAGDLILATPTQWDVLSRQWKRRKNIQTVQLFIAD
EIHLLGGHMGYVYEIIVSRMHYIRTQTELPMRIVALSASLANARDIGEWIDAKKHDIYNF
SPHVRPVPLELHIQSFSIPHFPSLMLAMAKPAYLAITQMSPDKPAMIFVPSRKQTRGTAR
DLLAAAVSDDDEDRFLHADVEQMRPLLDRVHEEALAEALSHGVGYYHEALSQSDRRIVKH
LYDNGAIQVLVASRDVCWELTNTAHLVIVMGTQYFEGREHRYVDYPLSEILQMFGKALRP
SKDGRGRGVLMLPQVKRDYYKKFLNEALPVESHLHNYLHDAFVTEISTKMIESGDDAINW
TTFTYFYRRLLGNPSYYGLTSTTHEGLSNYMSDLVETTLRELGESKIIEFDEDDGSVAPQ
NAAMIGAYYNISYITMQTFLLSLTARTKLKGILEIVTSATEFESVQVRRHEDSLLRRIYD
RIPVKMAQPSYDTPHFKAFVLLQAHFSRMQLPIDLAKDQEMILSRILSLLSAMVDILSSD
GHLNAMNAMEMSQMVVQAMWDRDSPLKQIPHFSPEVVKVANDFGIKDIFDFMEAMNPEEN
ADYNKLVKQLGLSQKQLAQAADFTNEKYPDLELEHEVVEEDEIRAGEPSYLSIKITRNIE
DDDEHDSTVHAPFYPAKKMENWWLVVGDDKTRNLLAIKRVTIGRELNVRLEYTVPSPGEH
NLKLFLMSDSYIGVDQEREFSVTAAESMDVDEDDEDEDEDEE
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccctcatcgcgatgtatcccaatacaagtactcggccatgtccaacctggtt
ctccaggcggaccgtcggtttgtcacacggcggactgatgaggccactggcgatccagag
tctcttgctgggcgcttgagcattaatgatatgggttcacgagtggctcgagacgaagcc
ccgaagcagaagaagcagcctggaatgcccgacattgaacgagggagtcttcaagaaggc
caggatgtcttgctaagagaacaacgaaaacgaaaacccgatgcccagcaagctggtgta
ttgggggcaaacgatgccttgattgagggtatcacataccgacctcggactgctgcgacg
cgggcgacttttgatctgatcctgaccctcgtggcaaacaaccttggcgacgtaccgcat
gatgtcgtacgaagtgctgcggacgccgcgctggagtatctgaaagacgatgacatgaaa
gatctggacaagaagaaagaaatcgacgatattcttggcacaaccctgagccccaagcag
ttcaacgaattaatcaatttgggaaagaaaattacggattacgatgcccaggacgaggat
gaggatgttgatatgagagataacaatgacgatgacgcagaaatcgacgaacggcagggt
gtagccgtcgcttttgatgaggatgacgaagaggacgagattgtcaacgaagttcgcgac
gaatcctcggaggatgaagaagaagaggaggaaggcgaggggacaacgaaagcagaggag
gatgccgcagaggcagacgacgacatgattctcgactcagcacccgtggattctaagcac
aagaagagcgagaagccttcaatacttgcacgggatatagatgccttctggctacagcgg
caaattggtctcctgtatcctgacgcacacgaacaagcagataagaccaaagaggcccta
cgcgtgctctccggagagcctgacgaagttggtggcgaagagaagtctcttcgagagatt
gaaaacgatttgatggagctctttgattttgaacatcacgaacttgtccagaagctggtc
gaaaatcgtgaaaaggttttctggctcacaaagcttgccagggcagcagatgcggaacag
cgggcaaatgttgagcgggaaatggtatcggaggggctgcaatggattcttaacgagctg
cggggcaagtctggaacagatggagataaggcagggaaaggaggtatcaagatggacatt
gatgttcccgcttcttttacagccgaggcgccaaagacagaacggctcgaaggacagcta
gttggcggactgcagccaaagaggctcatcaatctggacaacttggtttttgaccagggc
aaccatctgatgaccaaccccaaggtcagattaccagagggatcgacaaagagatctttc
aagggctacgaagagatccacgtcccccctccgaagaaacgaaatgacccagacgatatc
cttattcccatcaccgatatgccggaatggtcgcggctgcccttcagcacgtccaaatcc
ctaaacaagattcagtctaagacttacccaactgcctttgaagatgatggtaatatgctt
gtttgtgcgccgaccggtagtggtaaaacaaacgtggctatgttgaccatattgcgagaa
atcggcaagaatcgaaacccggaaaccggcgagattgatcttgatgctttcaagattgtt
tacattgcccccctgaaagctctagttcaagaacaagttggcaactttggaaagcgtctg
gagccatacggaatccgcgtgtctgagcttactggtgatcgtcaacttaccaagcagcaa
atctcagaaactcagatcatcgttaccacgcctgaaaaatgggatgttattactcgcaag
gcaactgatctcacttatactaacttggtgcgcctgattatcatcgatgaaattcatctg
ctccacgatgaccgtggtccagtattggagagcatcgtcagcagaaccattcgcaaaact
gaacaaaccggggaaccagtccgaatcgtcggtctttctgcaacgcttccaaactaccga
gatgttgctagcttcctccgcgtggacaccaagaaagccatgttccactttgatggttct
taccgaccttgtccattgcgccaggaattcatcggtgtcactgatcgcaaggccatcaag
cagctaaagacgatgaatgacgtaacatacaacaaagttatcgagcacgttggcacccac
aggaaccaaatgatcatctttgtgcattcccgcaaagagactgcaaagactgccaagtac
attcgagacaaggctctagaaatggagactattaaccagattcttcgacacgacgctggc
agccgagaggtcttggctgaagctgcaagccaagcaactgaccaggatctcaaagatatc
ctaccttacggattcggtatccatcacgcaggtatgaaccggatagacagaaccgatgtg
gaggatttgttcgccagaggcgccatccaagtccttgtatctacggccacccttgcctgg
ggtgtcaacttgcctgcccataccgttattatcaagggcacacaaatctactctccagag
aaaggtagttgggttgagttgagtccccaggacgttctccagatgctaggtcgtgcagga
cggcctcagttcgacacctacggtgaaggtatcataatcacgactcagagtgagattcag
tactatctttcgcttctaaaccagcaacttccgattgaaagtcagtttgttagcaaattg
gtagataacctcaatgctgaagttgtacttggcaacgtgagaactcgagatgagggtgtt
gaatggcttggatatacatatctctttgtccgaatgcttcggtctcctgggctgtatcaa
gttggcgcggaatacgaggacgatgaagctctagaacagaagcgtgttgatctgatacac
tctgcagcaatggccttgaggaagtcgaatcttgtcaaatacgacgagaaaacaggcagg
atccaatctaccgagcttggccgcattgcctcccactactacatcacatccagttctatg
gacacctataataacctcattcaaccttctatcacgactattgagcttttcagagtattt
gctctcagtgatgagttcaaatacatccctgtccgtcaagacgaaaagctggagctcgcg
aaactgatgggcagagtgccgattcccgtcaaggaaagcattgaagaatcacacgccaaa
atcaatgtcctacttcaagcgtatatttctcgtctgaagctagacggcctggctctcatg
gcagacatggtatatgtcactcagagcgccggccgaatcttgcgtgctatcttcgagatc
acgctgaagaagggctgggcgtcggttgcaaagactgctctagatctttgcaagatggct
gagaagcgaatgtggcctactatgtctccgctgcgccaatttccctcctgtccgcgcgat
attgtccaaaaagcagaaagaattgacgtctcttggagcagctattttgatcttgatcct
ccaagaatgggcgagctgctgggtatgcccaaagcgggacgtactgtctgcgggctggtt
gccaagttccccagagtcgacgttcaggcacaggtccagcctatgaccagatccatgctt
agagtcgagctgagcattactcctaatttcgaatgggatgatagcgttcatggtgctgct
gagagcttctggatcatagtcgaagactgtgatggtgaagatatcttataccatgacacg
ttcctccttcgcaaagactacgccgaatctgaagcaaacgaacatatcgttgactttact
gtcccaatcacggaccctatgccaccgaattacttcgtttcggtcatatcggataggtgg
atgcactctgagacgagattggctgttccgttccataagcttatcttgccagagaagttt
cctcctcacactgagctgcttgaccttcagcctctgctggtctctgctctgaaaattcag
gactacgtcaatctgtatccagactggaggcaattcaacaaaatccagacgcaaaccttc
aactcgctgtataagacggatcagaacgtattcattggtgccccggctggaagtggtaag
actgtatgtgccgagttcgctctcttgcggcactggtcgcagggcgatgatgctggtcga
gctgtttatattgctccgttccaagagctcgttgacgctcgcttacaagactggcagaag
aggctcagccacttgggcggtggaaaagagattgtgaaattgactggtgaaactgctgca
gacctcaagcttctcgaggctggtgatttgattctcgctacgccaacgcagtgggacgtt
ttatccagacagtggaagcggcggaagaatatccagacagtacagctatttattgcggac
gaaatccaccttctaggtggccatatgggctatgtatacgaaatcatcgtatcgcgtatg
cactatatccgtactcaaacagaactgcccatgagaatcgttgctcttagtgcctctttg
gcgaatgctcgggacattggcgaatggattgatgccaaaaagcacgatatctacaacttt
agtcctcacgtcaggccggtgccccttgagcttcacattcaatccttctcaattcctcat
ttcccgtctttgatgctggccatggcgaagcccgcatacttggctatcacgcagatgtca
ccagataagccagccatgattttcgtacccagccgaaagcagactagaggtactgcgcgc
gatttgctggccgccgccgtctccgacgatgacgaagaccgcttcttgcacgctgatgtg
gaacaaatgcggccccttcttgaccgcgtccacgaagaggcactcgctgaagccttgtct
catggcgttggctactatcatgaagctctcagccagagcgataggcgtattgtaaagcat
ctttacgacaatggtgctattcaagtacttgtagcatctcgagacgtctgttgggagttg
acgaacactgctcacctcgtgattgtcatgggaacgcagtattttgaaggccgagagcac
agatatgtagactatcccctcagcgaaattctacagatgtttggcaaggcgctacgacct
tcaaaggatgggcgcggccgcggagtgctcatgctacctcaagtcaagcgtgactactac
aagaaatttttgaatgaggccttgccagtcgaatcacacttgcacaattatctccacgat
gcctttgtcacagagattagcaccaagatgattgagtctggtgacgatgcgattaactgg
actaccttcacgtacttctatcgaagactactgggtaacccaagctactatggcttaact
agcactacccacgaaggcttgagtaactacatgtcagatcttgtggaaacgacgttgcgt
gagttgggcgagtctaagattattgagtttgatgaggatgatggatctgttgctccacag
aatgctgccatgattggcgcatactacaacatttcatacatcacaatgcaaacattcttg
ctctctctcacggcgcggacgaagctcaagggcatcttggaaatcgtcacttctgctacc
gaatttgaatctgtccaagtccgccgacatgaggacagcctcttacggcgcatttacgac
cgcattcccgttaagatggcacaacccagctatgatacgcctcatttcaaggcgtttgtt
ctgctccaagctcatttctcccggatgcagctcccgattgatcttgccaaggaccaagag
atgatcctttccagaattctcagcctcctcagcgccatggtagacattctctcatcagac
ggccacctcaacgccatgaatgccatggagatgtctcagatggttgtccaagcaatgtgg
gatcgagacagtcccctcaagcagattcctcacttctctccagaggtcgtgaaggttgca
aatgactttggaatcaaggacattttcgacttcatggaggctatgaatcccgaggaaaac
gcagactacaacaaattggtcaagcaactgggtctttcgcagaaacaactagcacaagca
gcagatttcacaaacgagaagtatccagacttggagctggagcatgaagttgttgaggaa
gacgaaattagagcgggcgagccatcctacctgagcatcaaaatcacgcgaaacatcgag
gatgatgatgaacatgactctacggtgcatgcaccattttatccagctaagaagatggag
aattggtggctggttgtgggcgacgacaagactcgaaacctgctggcgattaaacgagtt
accatcggccgcgagctgaacgtacggctagaatacactgtgccatctcctggtgagcac
aatctcaagctgttcctaatgagtgatagttatatcggagtggaccaagagcgggagttt
tcagtgacggcagcagagagcatggatgtggacgaggacgacgaggacgaggacgaagac
gaggagtag
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integrated database retrieval system
