Trichoderma asperellum: 36613052
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Entry
36613052 CDS
T10296
Symbol
VTS1, TrAFT101_011302
Name
(RefSeq) Flap-structured DNA-binding and RNA-binding protein
KO
K27407
RNA-binding protein VTS1
Organism
tasp Trichoderma asperellum
Brite
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
36613052 (VTS1)
Membrane trafficking [BR:
tasp04131
]
SNARE
SNARE associated proteins
Others
36613052 (VTS1)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
36613052
NCBI-ProteinID:
XP_024754531
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Position
7:complement(join(1707110..1707138,1707225..1708535,1708593..1709115))
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AA seq
620 aa
AA seq
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MLNMSGSHVAGNRNSTPEVNATPSLRPPSSRAVGSGSSLRASADMAAISGTSSSSRIRPS
SDFYGQPQQGGLGPAGLDIDSQDKIAQQWIADIDQYETTLEEMAAATLDQDFKDELSAIE
QWFRVLSEAERTAALYALLQQTTQVQIRFFIQVLQQMGKNHPMSGVLSPATFDKDPMSSR
LSDAMNKLNVDSARNSFARNSAVSSTKRHSGLDASTINAMFPDAAAAIATEKAKFTQQTG
NPPSSNRNSLAIDPRAAMTGPNIAAAPQESRDANAAPAASPWASGGDAASASKAGSSQTP
MGQFVQPPASAGLRSPRPQLTSNSTLQTTTLTARDKTPADLPLLSPYANGGGSWASMVNT
PMAPTFNTGNSAGQADMIANATAMKLAALSTVNNRFALDDVRKYRRARSNDAPGNAHSQM
PPTPSQINIPSANVVMINEHGQVMTRDQLMALQAQQGLSFGGQRSRPSSPGLPLQSGMGP
MSHFTSPQHNGFLSAYDGSGLMSGGIPPVGLGQLGINTHEGYLSDHSDMVRGRSPRGRRG
SSKPPEDPTDPTLLQDIPSWLRSLRLHKYTDNLKDMKWTDLVELDDKALEDRGVNALGAR
RKMLKVFEQVKEAKAEGRLG
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatatgtctgggagccacgtcgccggaaatcgcaacagcacccctgaagtcaat
gccactccttctctaagaccgccgtcctctcgggcagttggctctggcagctcgctgcgc
gcgtctgccgacatggcggccatctcagggacctcgtcgtccagccgcatcaggccgtcg
tccgacttctacggccagcctcagcaaggcggccttggccctgctggcttggatatcgat
tctcaggacaagatcgcccagcagtggattgcggacattgaccagtatgagacgacgctg
gaggagatggctgccgccacgctcgaccaagacttcaaggacgagctcagcgccattgag
cagtggtttcgagtgttgagcgaggctgagcgcacggccgctctgtatgcgttgctgcaa
cagaccactcaggtccagattcgcttcttcatccaagtcctccagcagatgggcaagaac
catcccatgtctggcgttttgtcacccgcgacttttgataaagatccgatgtctagtcga
ctcagcgatgctatgaacaagctcaatgtcgactctgctcgaaactcgttcgctcgcaac
tcagctgtctcatcgactaagcgacactctggccttgacgcttctacgatcaacgccatg
ttcccggatgccgccgccgctattgcaaccgaaaaggcgaaattcacccagcaaacaggg
aacccaccttcgtcaaaccgcaacagcctagccatcgacccacgagccgcgatgacagga
cctaatattgcagccgcccctcaggaatctagggacgccaatgctgccccggcggcatca
ccgtgggctagcggcggagatgcagcgtcagcttctaaagcaggctcgtcccaaactccc
atgggccaatttgtacagcctccagcatcggcgggactacgatcgccaaggccgcagctg
actagcaattccactcttcaaacgaccaccttgacggcccgggataagactccagctgat
ttgcctctcctatccccatatgcgaatggaggtggcagctgggcttctatggtcaacact
cccatggcgccgacattcaacaccggaaattctgctggtcaggctgatatgattgccaac
gcgactgcaatgaagctggccgctctttctaccgttaacaatcgcttcgctctcgatgac
gttcgcaaatatagaagggctagatctaacgatgcccccggaaatgcacacagccaaatg
ccgccaactccctcgcaaatcaatatccccagtgctaacgtggtgatgatcaacgaacat
gggcaagtcatgactcgtgaccaactaatggctctccaagctcagcagggcctcagcttt
ggaggacagcgatctcgtcccagctctcctggtctacctttgcagtctgggatgggaccc
atgtctcatttcacttcgcctcaacacaacggctttcttagcgcatacgacggctctgga
ttgatgtctggcggcatcccacctgtcggcttgggacagctaggaatcaatactcatgaa
ggctacctctcagaccactctgacatggtccggggccgttcaccgagaggaagacgggga
agctccaagccgcctgaagatcccaccgaccctactcttcttcaagatatccccagctgg
cttcgtagtctgcgactacacaagtacacggataatctgaaggatatgaagtggacggat
ctggtcgaattagacgacaaggccttggaagaccgaggcgtcaatgctctcggagcgcga
cgcaagatgctcaaggtctttgaacaagtcaaagaagccaaagcagaaggcagactagga
taa
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