Trichoderma asperellum: 36613162
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Entry
36613162 CDS
T10296
Symbol
TrAFT101_003672
Name
(RefSeq) uncharacterized protein
KO
K12881
THO complex subunit 4
Organism
tasp Trichoderma asperellum
Pathway
tasp03013
Nucleocytoplasmic transport
tasp03015
mRNA surveillance pathway
tasp03040
Spliceosome
Brite
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
36613162 (TrAFT101_003672)
TREX complex
36613162 (TrAFT101_003672)
Spliceosome [BR:
tasp03041
]
Complex C
Other components
EJC/TREX
36613162 (TrAFT101_003672)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
36613162 (TrAFT101_003672)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
36613162
NCBI-ProteinID:
XP_065983066
LinkDB
All DBs
Position
2:join(4151514..4151564,4151652..4151732,4151953..4151984,4152046..4152077,4152146..4152197,4152265..4152334,4152392..4152539,4152598..4153094)
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AA seq
320 aa
AA seq
DB search
MASDKMDRGLDEIIADKRSNGSRNRRGGDRRRDRQDYPRDGVKKSSRNEPRNLDSEWVHD
RYEENTYRNSRAAPRRRRDSPSGGDARGARLRVENIHYDLTEEDLDELFRRIGPITKLQL
RYDRSGRSEGVAFVTYEDREDAAEAIKQFDGANANGQPIRLIALPNGNSRNPFDTAVMPG
KPLSERISAPGGRSRSLSPHRRYDEEEAARRGIDRYVPGGGSRSRSPMPPRRGAGGRRPG
ARREGGRDQDAARGGRGGRGGARPERTNTPRPKKTQEELDAEMEDYFNANGGAAEPAAEA
AAPSEAAPAPAHADDIDMIE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgataaaatggaccgcggcctcgacgaaatcattgctgacaagcgcagcaat
ggatctcgaaaccgacgcggtggcgaccgccgccgtgatcgccaagattacccccgtgac
ggggtgaaaaagtctagtcgcaacgaacctcgaaacctggacagtgaatgggttcatgat
cgatacgaagagaacacctatcgcaacagcagagcagcaccgcgtcgcaggcgcgattcc
cccagcggaggagatgctcgcggcgcccggcttcgcgtggagaatatccactacgatctt
acagaggaagatctcgatgaacttttcagaagaattggccccatcacaaagctacaattg
cgctatgaccgctctggtcggtctgagggtgtagcctttgtcacatacgaagatagagaa
gacgccgctgaagctattaaacagtttgatggcgcaaacgccaacggccagccaattcga
ctgattgcgctgccaaatggcaattctcgaaacccgttcgataccgccgtgatgccagga
aaacccctatcagagcgcatttctgctcctggaggcagatcccgatcactctcccctcac
cgaaggtacgatgaagaagaagctgctcgcaggggcatcgatcgatacgttccaggtggt
ggtagccgctccaggagccctatgccgcctcgccgcggcgcaggaggacgtcgccctggt
gctcgccgagaaggtgggagagatcaagacgcggctcgcggcggccgaggtggccgtgga
ggagcccgtcctgagcgaacaaatactcctcgacctaagaagacccaagaagaattggac
gctgagatggaggattatttcaacgccaatggtggagctgcagagcccgctgcagaagcc
gctgcgccaagcgaagcagccccagcgccagctcacgccgatgacattgatatgattgag
tag
DBGET
integrated database retrieval system
