Trichoderma asperellum: 36614198
Help
Entry
36614198 CDS
T10296
Symbol
SLT11, TrAFT101_000386
Name
(RefSeq) Pre-mRNA-splicing factor slt11
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
tasp Trichoderma asperellum
Pathway
tasp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
36614198 (SLT11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tasp03041
]
36614198 (SLT11)
Spliceosome [BR:
tasp03041
]
Complex B
Other components
Prp19-related factors
36614198 (SLT11)
Complex C
36614198 (SLT11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
RRM_YTH1
Nup35_RRM_2
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
36614198
NCBI-ProteinID:
XP_024764592
LinkDB
All DBs
Position
1:join(1318212..1318349,1318455..1319444)
Genome browser
AA seq
375 aa
AA seq
DB search
MPPQIKQDLNRSGWETTDFPSVCENCLPENPFVKMLKEDYGAECKLCTRPFTVFSWAAER
AQGRKRRTNVCLTCARLKNCCQSCMLDLSFGLPITVRDAALKMIAPGPQSEINREYFAQN
NEKLIEDGKAGTEEYEKTDEKARELLRRLAASKPYFRKGRTVDESELAAARTGGNAAVGA
GVGGAGPIRTRDSRAAAAAGAGPRSGGRGKGRPAFPSAAQLPPSPKDWLPPDDPNIMSLF
VTGVEDDLPEYKLRDFFKVHGKIKSLVCSHMSHCAFINYETRDGAEKAAAACQGRAVIAG
CPLRIRWGQPKAIGTMNREQRYQMLQDARIRRNNSQQQQNAIEGGQQSGASGAKAIAAAP
PGAEETPAYASLAGE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccagatcaagcaggacctcaaccggtcaggatgggagacgaccgacttcccg
tctgtctgcgaaaactgcctgcccgagaacccgtttgtcaagatgctcaaggaagattat
ggagccgaatgcaaactgtgtacgcgaccattcaccgtcttcagctgggccgccgagcgc
gcgcagggccgcaagaggcgaaccaacgtctgcctgacgtgcgcgcgactcaagaactgc
tgccagagctgcatgctggatctcagcttcggcctgcccatcaccgtccgcgatgccgcg
ctcaagatgattgcgccgggcccccagtccgaaatcaaccgagaatactttgcgcagaac
aacgagaagctgatcgaggacggcaaggctgggacagaggagtatgagaagacggacgaa
aaggcccgcgagctcctgcgccgtctggccgccagcaagccatactttcgcaagggacgg
actgtggacgagtcggagcttgccgccgcgagaaccggtggcaacgctgcggtgggagct
ggcgttggaggcgctggcccgattcgaacccgagattcacgggctgctgcagccgctggt
gccggtccgcgatctggtggacgaggaaaaggccgtcctgcattccccagcgcggcacag
cttccaccgagcccaaaggactggctgccgccggatgatcccaacatcatgtccctcttc
gtcaccggcgtggaggacgatctccccgagtacaagctccgcgatttcttcaaggtccac
ggcaagatcaagagcttggtgtgctcacacatgtcccactgcgcattcatcaactacgag
acgagagacggtgcggaaaaggccgcggccgcatgccagggcagggccgtgattgctggg
tgcccactgagaattcgctggggacagccaaaggcgattggaacaatgaatcgcgagcag
cgctaccagatgctccaggacgctcgcatcaggcggaacaactcacagcaacaacagaac
gccattgaaggaggacagcagtcgggcgcatcgggcgcgaaagccattgcggcggcgcct
cctggagcggaagaaacacctgcttatgccagtttggctggagagtag
DBGET
integrated database retrieval system
