Trichoderma asperellum: 36614721
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Entry
36614721 CDS
T10296
Symbol
TrAFT101_002009
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
tasp Trichoderma asperellum
Pathway
tasp03030
DNA replication
tasp03410
Base excision repair
tasp03420
Nucleotide excision repair
tasp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
36614721 (TrAFT101_002009)
03410 Base excision repair
36614721 (TrAFT101_002009)
03420 Nucleotide excision repair
36614721 (TrAFT101_002009)
03430 Mismatch repair
36614721 (TrAFT101_002009)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tasp03032
]
36614721 (TrAFT101_002009)
03036 Chromosome and associated proteins [BR:
tasp03036
]
36614721 (TrAFT101_002009)
03400 DNA repair and recombination proteins [BR:
tasp03400
]
36614721 (TrAFT101_002009)
DNA replication proteins [BR:
tasp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
36614721 (TrAFT101_002009)
DNA Replication Termination Factors
ELG1-RFC complex
36614721 (TrAFT101_002009)
Chromosome and associated proteins [BR:
tasp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
36614721 (TrAFT101_002009)
DNA repair and recombination proteins [BR:
tasp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
36614721 (TrAFT101_002009)
Check point factors
HRAD17(Rad24)-RFC complex
36614721 (TrAFT101_002009)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA
AAA_16
Rad17
nSTAND6
DUF7804
AAA_24
ATPase_2
T4SS-DNA_transf
SLFN-g3_helicase
MTC2_N
Mg_chelatase
Rep_fac_C
ABC_tran
Motif
Other DBs
NCBI-GeneID:
36614721
NCBI-ProteinID:
XP_024763127
LinkDB
All DBs
Position
1:complement(join(6375633..6375981,6376045..6376667,6376737..6376823))
Genome browser
AA seq
352 aa
AA seq
DB search
MALIVDKHRPRSLEALSYHQELSDRLQSLAQSGDFPHLLVYGPSGAGKKTRIVATLKELF
GPGVEKIKIDARVFQTSSNRKLEFNIVASNYHLEITPSDVGQYDRVVVQDLLKEVAQTQQ
VDQSAKQRFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTL
LVRVAAPTHEEICDVLAQSAKKENWEVVKGLHERIAVESGRNLRRALLMYEAVHAQNEKV
TDTTPIPPADWEALIGQIAKEIIEEHTPARILQVRAKLYDLLTHCIPPTTILKTLTFKLL
GLIDDGLKGEVIKWSAFYEHRIKTGTKVIFHLEAFVAKFMRILEMYLMSMDM
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggccctcatcgtcgacaagcatcgtccgcggtccttagaggctctttcataccaccaa
gagctctcagaccgacttcaatctctcgcccagagcggtgacttcccccatcttctagtc
tacggcccatcaggagctggaaagaaaacaagaatagtggcaacactgaaagagctgttt
ggcccaggtgtagagaagatcaagatcgacgcacgagtattccagacttccagcaaccga
aagctggaattcaacattgtcgcttcgaattaccacctggaaatcacgccgtccgatgta
gggcaatatgatcgagttgtcgttcaagatctcctgaaagaggtggcgcagacgcaacag
gtagaccagtccgcaaagcagcgattcaaggtcgttgtcatcaacgaagcagaccacctc
actagggatgctcaggccgcgcttcgtcgtacaatggaaaagtactcgccaaacttgcgt
ctgatccttttagccaattcgacagcaaatatcattgcgccaattcgttcaagaacgctg
cttgtcagagttgccgctcctacgcacgaggaaatctgcgacgtgcttgcgcaatcagca
aagaaagagaattgggaggtcgtcaaaggtctacatgaaagaatagctgtggagagtgga
aggaatcttcgtcgtgcattgctgatgtacgaggccgtgcatgcacaaaatgagaaagtg
acagacacaacgccaatcccccccgcagattgggaagcactgatcggccagatcgccaag
gagattatcgaggaacacacgcccgcgaggatcttgcaggtgcgcgccaagctgtacgac
ctactaacgcactgtatcccccctacgacgattctcaagactcttactttcaagttactg
ggtctcattgatgatgggctgaaaggagaggtcatcaaatggtctgccttctacgaacac
cggataaagacaggcaccaaagtcatctttcatctggaagcatttgtggctaaattcatg
cgcatcttggaaatgtatctgatgagcatggacatgtga
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