KEGG   Trichoderma asperellum: 36615103
Entry
36615103          CDS       T10296                                 
Symbol
TrAFT101_005001
Name
(RefSeq) uncharacterized protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
tasp  Trichoderma asperellum
Pathway
tasp03013  Nucleocytoplasmic transport
tasp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tasp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    36615103 (TrAFT101_005001)
   03015 mRNA surveillance pathway
    36615103 (TrAFT101_005001)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tasp03019]
    36615103 (TrAFT101_005001)
Messenger RNA biogenesis [BR:tasp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     36615103 (TrAFT101_005001)
   mRNA cycle factors
    P-body specific factors
     36615103 (TrAFT101_005001)
SSDB
Motif
Pfam: Smg4_UPF3 RRM_1
Other DBs
NCBI-GeneID: 36615103
NCBI-ProteinID: XP_024759635
LinkDB
Position
3:complement(join(1228445..1230050,1230141..1230412,1230472..1230549))
AA seq 651 aa
MSTQAPQVLSRRTNGAASASANESAKNKATAEGGASRPNKGKGTAEKQSEGRGTTHDAES
TKAPKTKTPHEGEKVIIRRLPPGMTETEFVSILGSEWGVGNGKVDWFSYAPGKVCNEISK
PSRPSRAYLHVMRKDYIMPLSDIVRNATWEDAKSTFTSPSLIGPPSLEMSIYKKVPGNKK
RVDARQGTIDQDPEFMAFLEGLANPVQPKEVTENEEVEDAAETKVTTTPLIEYLKEKKAN
KLKEAAAAKSAKHSREAAATKGKSASKDEEGSKKKGKESKSSKSEKAAPKEPVKILTKKA
AAAEQSAEAAKPAASQATATEAPTPKSRRAGVSIAARMLQRDLGLSPGSAYRRARQDAAK
AESSSKTAATEENKESSGAGKENQQTSASAPVESTSTQASAKAQQSTNSSSKSQQPARKS
RSGKNAEKTKASEKSGQNATTTPPVILKKKPAANNDADSPKSTAEAASATQQNSSKSGTN
AANGQKGSSAKSSGSQKKSAAASSSNATRGFVKHANSSQGITEPVLKQALQVFGTVTFIE
VDKRKGFAYVDFADHSGLAKAISASPISVAQGTVQVLERKDKKPAPAASGSGNAAAAAAA
PSNATSNSAAPEKSSSSGRGRRGRGGKGAANTNSNQPASTNGTPIAATSGG
NT seq 1956 nt   +upstreamnt  +downstreamnt
atgtcgactcaagcaccgcaggtcctgtctcgcaggacaaacggggcggcttccgcctcg
gcaaatgagtctgccaagaacaaagccactgctgagggcggcgcgtctcgtcctaacaag
ggcaagggcacggccgagaaacaaagtgagggtcggggcaccacccatgatgcggaatcg
acaaaggctcccaagaccaagactcctcatgaaggtgaaaaggtcattatccgccgccta
cctccgggcatgactgagaccgaattcgtctccatcttgggctctgaatggggagtgggc
aatggcaaggttgattggttttcttacgccccaggcaaggtttgcaatgagatctcaaag
ccatcacgaccctctagggcgtaccttcatgtgatgcgtaaggactatatcatgcccctt
agcgatatcgttcgaaatgcgacctgggaagacgccaaatccaccttcactagtccttct
cttatcggccccccttccttggaaatgtccatctacaaaaaggtcccaggaaataagaag
cgtgttgatgctcgccagggaactatcgatcaagacccagagtttatggcctttcttgaa
ggtctcgctaatccggtgcagccaaaggaggttactgaaaacgaggaggtcgaggatgcg
gccgaaactaaagtcaccaccaccccattgattgagtatctaaaggaaaagaaggcaaat
aagcttaaagaagctgctgctgctaagagcgccaaacactctagagaagccgcagcaact
aagggaaagtctgcgtccaaggatgaagagggctcaaaaaagaagggcaaagagagcaag
agttccaagtctgagaaagccgctcctaaggaacccgttaaaattctcaccaagaaggct
gctgctgccgaacaatccgccgaagccgccaaaccggccgcaagccaggcgactgctaca
gaagcaccaacccccaagagtcgccgtgctggcgtgtccatcgccgcccgcatgctgcag
cgagatcttggtctcagtccaggtagtgcctatcggcgagcccgacaagatgctgctaaa
gctgagtccagctctaagacggccgccaccgaagagaataaggaatcatccggggcagga
aaggagaaccagcagacctctgcatcggctccagtagaatcaaccagtactcaggcgtct
gctaaagctcagcaatcgacaaatagctcttccaagagccaacagccagcgcgtaagtct
cgcagcggtaaaaatgctgaaaaaactaaggcatcggaaaaatctgggcaaaatgcaacc
acaactccacctgttatccttaagaagaagcctgctgccaacaatgacgcagattcaccc
aagtctactgctgaggccgcctctgcgactcaacaaaacagctccaagtcagggaccaat
gcggcaaatggccaaaagggcagctctgccaaatcttcggggtctcaaaagaaatctgcc
gcggcatcatcttccaacgccactcgtggctttgttaagcacgccaactcttcccagggc
atcaccgaacccgtgttgaagcaagccttgcaagtatttggtaccgttacttttatcgag
gtagacaagcgtaagggcttcgcgtatgtggattttgccgaccactccggccttgctaag
gctatctctgcaagccccatttccgttgcacaaggaactgttcaagttctcgaacgtaag
gataagaagcctgctccggctgcttctggtagcggcaatgctgctgctgctgctgctgcc
ccatccaatgctacaagcaatagcgctgctcctgagaagagctcaagcagcggacgtggc
aggcgtgggaggggtggtaaaggagctgctaatactaacagcaatcagcctgcttctacg
aatggcactcctattgcggcaacgagcggtggctga

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