Trichoderma asperellum: 36615217
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Entry
36615217 CDS
T10296
Symbol
TrAFT101_006573
Name
(RefSeq) uncharacterized protein
KO
K03361
F-box and WD-40 domain protein CDC4
Organism
tasp Trichoderma asperellum
Pathway
tasp04111
Cell cycle - yeast
tasp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
36615217 (TrAFT101_006573)
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
36615217 (TrAFT101_006573)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tasp04121
]
36615217 (TrAFT101_006573)
Ubiquitin system [BR:
tasp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
36615217 (TrAFT101_006573)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_Gbeta
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR41
WDR55
Beta-prop_SCAP
DSE1_N
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
F-box-like
Beta-prop_WDR75_1st
F-box
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_ACSF4
PQQ_2
WDR54
Beta-prop_NWD2_C
Beta-prop_DCAF12
Beta-prop_VPS8
PEP5_VPS11_N
F-box_4
Motif
Other DBs
NCBI-GeneID:
36615217
NCBI-ProteinID:
XP_024758235
LinkDB
All DBs
Position
4:complement(join(604791..604898,604993..607677,607760..608128))
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AA seq
1053 aa
AA seq
DB search
MTPSPSSQQGLEPRRPRSGHTQTVSVNIAESTPPNGNRRFQLHVSECVETKTVTTTTRLT
RKFPQVFIRDPAPLESLDTKEYPLATKPTPPELADFSYSFGAEEEDFDAEMMDDVDDHDD
SQLTKRSQSSTIAPPLIKQESISGEIQTPDALSRISSASPSEHYSRRSNRLAAAESPTTT
ATRSSQRLARSSALHAVSNRLRRSVIQGSSGSGAGSGSGSSNLRHDASDRVTRNTSIGIL
ATPDITETAGPIPNRSLQRRSMHSEYSPNSQDVIRGRSKSPPYEASSPAGSDAHTFSSTV
ATPPITDADPESFADDTDESLEPSLRPQHRPAIDVVAAQDASLPSPRLSPTLAAAQLHSA
DPDETAQSSFKTDQSATWMGESQVTEDGGFTDMVPFERPSHGKRAMVRYDQHQPVMLDPQ
MLLEAFDSMKTEMKTFMMYQFLRRCPRPTLRIVADAVNPALKCDFLQQLPLELSYHILSY
LDLRDLTRAARVSKHWRSIVDRNETGWKELFDRDGFTLPPGELSKAIIQGWGWQDPVGID
GYEQDLSMQSRLTSSEKELTQALKQEATPKVRTSKRKRGLNAYSSERSKRRASTQEVAAN
RDEKAQGEAKQHKSAGPLSAAHAAMQAVPDPQLGLPSLRQLHLFKSLYRRHYMIRHSWTN
GETKPSHVAFAAHPRHVITCLQFDDDKIITGSDDTLIHIYDTKTGKLRRKLEGHEGGVWA
LQYEGNILVSGSTDRSVRVWDIERGLCQQVFYGHTSTVRCLQILMPTATGMAKDGSPIMQ
PEKPLIITGSRDSQLRVWRLPEVGSRRYIQTGPPAQESDCPYFIRVLTGHTHSVRAISAH
GDILVSGSYDSTVRVWRISTGDALHVLHGHSQKVYSVVLDHERNRCISGSMDSLVKIWDL
ATGSCLYTLEGHSLLVGLLDLRDDRLVSAAADSTLRIWDPQTGKCRNTLMAHTGAITCFQ
HDGRKVISGSEKTVKMWDVRTGECVQDLLTDLSGVWQVKFDGRRCVAAVQRDNLTYVEIL
DFGAVRDGHPQQELGRRILLNEPEVRAMIEEEA
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgacgccctcgccatcctcccagcagggcctcgagccgcggcggcccaggagcggccac
acgcagaccgtctccgtcaacatcgccgagagcacgccgcccaacggcaaccgccgattc
caactccacgtcagcgagtgtgtcgagactaagaccgtcaccaccacaactcgcctgacc
aggaagttcccccaggtcttcatccgcgaccccgcccccctcgagagcctcgacaccaag
gagtatcccttggccacgaagccgacgcctcccgaactggcagacttttcttacagtttt
ggcgctgaagaggaggatttcgatgcagaaatgatggacgatgtcgatgaccacgacgac
agccaactgacaaaaagaagccagagcagcacaattgccccgcctctgatcaaacaggag
tcaatatctggcgagatacagacacccgacgctttgagccgcatttcgtcagcctcacca
tccgagcactactctcgccgaagtaatcggttggccgctgcagagtcaccgacaaccaca
gcgacacgatcttcacagcgtctagcacgttcctcagccttgcatgccgtgtccaacagg
ctgcgccggtctgtcatacaaggaagtagcggaagtggcgctggaagcggcagcggtagc
agcaatttacgccacgatgccagcgacagagtcacaagaaatacctccattggcatactt
gccacgcctgacatcactgagacggccgggccaataccgaaccgctcattgcagcgacgg
tccatgcattccgaatattcacccaactcccaagacgtcatccgcggccgctcaaagtcc
cccccctacgaggcgtccagccccgccggtagtgatgcccatactttcagcagcaccgtc
gccacgcccccgattaccgatgcagacccggaatcctttgcagatgacaccgacgaatcc
ctcgaaccgtcacttcgaccgcagcaccggcccgcaatcgacgtcgttgctgcccaggat
gccagtcttcctagtccgagattatccccaaccttggccgccgcccagctccactctgcc
gaccccgacgagaccgctcagtctagtttcaagacggatcagtcggccacgtggatggga
gagtctcaagtaaccgaagatggaggatttaccgacatggtaccctttgagcgtccatcc
cacggcaaacgagccatggtgcgatacgaccagcaccagcctgtcatgctggatccgcag
atgctgctggaggcgtttgactccatgaagacggagatgaagacattcatgatgtaccaa
ttcctccgccggtgtcctcgacccacactccgcatcgtggctgatgctgtgaatcccgca
ctcaagtgcgactttttgcagcaactgcccctcgagctgagctaccatatcctatcctac
ctcgacctccgcgacctcacccgcgccgcccgagtatcaaagcactggcgtagcatcgta
gatcggaacgagaccggctggaaagaattgtttgatagagatggcttcaccctccctccc
ggggaactcagcaaggccattattcaggggtggggttggcaggatccggttggcatcgac
ggctacgagcaggatttgagcatgcaaagccggctaacgtcatcggaaaaggagcttact
caggctctgaagcaagaggccacaccgaaagtgaggacttcgaagcgcaagcgtggtctc
aatgcctacagctcggagcgttccaagaggcgggccagtacccaggaggtggctgccaac
cgggacgaaaaggctcaaggcgaggccaagcagcataagtcagctggacccctttcggct
gcccacgctgctatgcaggccgtccccgatcctcaactgggcctgccgagtctgcgacag
ctccatctcttcaaatccctctatcgtcgacactacatgatccgccacagctggaccaac
ggcgagacgaagccgagccacgtagcgtttgcggcccaccctcgacacgttatcacctgc
ctccaattcgacgatgacaagattatcacgggcagcgatgacacactcatccacatctac
gacaccaagactggtaaactccgcaggaaactcgagggtcacgaaggtggcgtctgggct
ctccagtacgagggcaacatcttggtctcgggctcgacggacagatcggtgcgagtttgg
gatattgagcgcggcctctgtcagcaggtgttctacggacacactagcacggttcgctgc
ctgcaaatactgatgccgacggcgactggcatggccaaggacggctctcccatcatgcag
ccggagaagccgctgattattacgggctccagagatagccagctgcgtgtctggcgtctg
cccgaggttggatcaaggcgatatatacagaccggcccgccggcccaggaatccgactgt
ccgtacttcatccgcgttctgactggacacacccactcggttcgcgccatttcggcgcac
ggcgatatcttggttagcggatcctacgacagcactgtccgagtttggcgaattagcacc
ggagatgccctgcatgtgcttcacgggcattctcagaaggtctattctgtggtgctcgac
cacgagcgcaaccggtgcatctcgggctccatggactctctagtcaagatttgggacctc
gccacgggatcttgcctctacacgctagaaggccatagcctgctggttggtctgctggat
ctacgtgacgaccgccttgtctcagcagctgcggattcgacgctccgtatctgggatcct
caaaccggcaaatgccgaaacaccctcatggcgcatacgggtgctattacctgcttccag
catgatggccgaaaagttatcagcggcagcgagaagactgtcaagatgtgggatgttcgg
acgggagagtgcgtgcaggatctcctgacagatcttagcggggtctggcaggtcaagttt
gatggaaggcgatgcgttgcggccgtccagagagacaacttgacttatgtagagatcctt
gactttggcgctgttcgagatgggcatcctcaacaagaactcggacgacgtattctccta
aacgagccggaagttcgtgctatgattgaagaagaagcttaa
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integrated database retrieval system
