Trichoderma asperellum: 36615343
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Entry
36615343 CDS
T10296
Symbol
TrAFT101_011071
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
tasp Trichoderma asperellum
Pathway
tasp03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
tasp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
36615343 (TrAFT101_011071)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
36615343 (TrAFT101_011071)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
36615343
NCBI-ProteinID:
XP_024757019
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Position
7:join(910514..910675,910858..911319,911396..912294,912366..912561,912627..913007)
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AA seq
699 aa
AA seq
DB search
MSSDGDEVAEDYRLALEDLSSNMRFEISNLTVIARENTEHALAIAEVLQQHILKAPPNKK
LPALYVMDSIVKNVGTPYTLYFGRTLFKIFMESYAVVDHGVRRKMEEMLKTWKDPVPGSM
DTRPVFSHELVRPIENALMKARAASMPQQAQSAIPGRPRSAMFPHRNTPTPPGMRGYPGP
AGNFPPQPHPFANGGHPGEPVAGYPGQQPAPYPPPSTLAPYNSTPASFPQAAQGPYGSGL
PLPSGISVETLSSDIQNLIVAMRAEFSQNPHDSGAQSRLKALLDLQSVVQHSNLPPDQLE
LIKNKVTELAAVTIRATLGHSSANSTPIPAPAVPPAMALSVHPPSTSVTPSPVPAAQSAV
PVTLDSLLGKGAMAALLSMQSSNSQQNTTPKPPFAGVPIRSPQMNHNEPPKAAAAPAPPP
SMPAAPASSASSLLDQLRAAGMLPPATPTNVPAPNQAPAVPVMPPSIFPSGLPASIASLL
AAHKPDSGRSSADSLASSTGLDFAIKKQFRPESIAALYDDLGPPCTQCGRRFRTDEEGRR
KKTAHMDWHFQVHQRSTEAEKRGTHRSWYVDQQDWLKAREAVDAIHDVSSKEESAQASKD
SEGPKYILVPDPSSGINNVCPICQERFENKWLDTVQEWVWLDTILVGNRAYHASCRAEAT
RDRESTPVQSRRTPEPVLGKRKAETGLASPKIRVQKPFM
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgatggcgatgaggtggcggaggattaccgtcttgccctcgaggatctctcc
tctaatatgcgttttgagatcagcaacttgacagtaattgccagagagaatacagagcat
gctttggctatcgcagaggttctgcagcagcacattctgaaggcaccgccaaataagaaa
ctgccagccttatatgtaatggactcaatcgtcaagaatgttggcactccatatacgcta
tacttcggtcgaactctgttcaagatattcatggagtcatatgcggtggttgatcatggc
gtgcgcagaaagatggaggagatgctcaaaacatggaaagatcctgttcctggatcaatg
gatacgcgccccgtcttttcacacgaattggtgcggccgattgagaatgctcttatgaag
gcccgagcagcaagcatgccccaacaggcacagagcgccataccaggcagacctcgatca
gcaatgttccctcatcggaacacaccgacgccgcctggaatgcgtggataccctggcccg
gctgggaactttccaccacagcctcatcctttcgccaacggagggcatcccggcgagccg
gtcgctggctatcccggacagcagcctgctccttatcccccaccatctactttggcccct
tacaattcgaccccagcttccttcccccaagccgcccaaggaccatacggctcaggattg
cctctgccgtctggaataagcgtagagaccttgagcagtgacattcaaaatttgattgtt
gcgatgagggccgagttctcgcagaatccgcatgatagcggagctcagagcaggttaaag
gctctgttggatctccagagcgttgtacaacactcaaatctgccaccagatcagcttgag
ctcattaaaaacaaagtaacagaacttgctgccgtgacaattagggccactctcggccat
agctctgcaaactctacccctatcccagcaccagcggtgccgccggctatggcgctttcc
gtgcatcctccctctacctctgtaaccccgtcaccggttccggcggcccagtccgctgtg
ccggtgactcttgattcattgcttgggaaaggggcgatggcagctttgctgagtatgcag
tcgagcaactctcagcagaacacaacacctaagcctccgttcgctggcgtccctatacgg
tcgccgcagatgaatcataacgagccacccaaggcagctgcagcaccagcaccaccacca
tccatgcccgcggctccagcctcgagtgcctcttccttattagatcagctccgagctgcg
ggtatgctcccacccgcaacacctaccaatgttccagctcccaaccaggcaccggctgtt
ccggtaatgccgccttctatatttccttcgggcctaccagcgagcatcgccagcctacta
gcggcccataagccagattctggccgatccagtgcagatagcctggccagctctactggc
ctggatttcgctataaagaaacaatttcgtcccgagtctattgctgcgttatatgacgat
ctaggacctccgtgtacgcagtgcggcagacggtttaggactgacgaagaaggaagaaga
aagaagacggctcatatggattggcactttcaagtgcaccagcggagcacagaggccgaa
aaacgaggcactcatcggagctggtacgttgaccagcaggactggctcaaagcccgggaa
gctgttgacgcgatacatgatgtgtcttccaaggaggagtcggctcaagcctctaaggat
tcggagggaccaaagtatatcctcgtaccagatccaagcagcggcattaacaatgtttgc
ccaatctgtcaggaacgatttgagaacaagtggctcgatacggtccaagaatgggtatgg
ctcgatacaatcttggtgggcaaccgggcatatcacgcctcatgccgtgctgaggcgacg
agggatcgagagtctacacccgtccaatcacggcgcactccggaaccggtgctgggaaag
agaaaagcagagacgggtcttgcgtctccaaagattagagtgcagaagccgtttatgtaa
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