Trichoderma asperellum: 36615549
Help
Entry
36615549 CDS
T10296
Symbol
TrAFT101_004397
Name
(RefSeq) uncharacterized protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tasp Trichoderma asperellum
Brite
Enzymes [BR:
tasp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
36615549 (TrAFT101_004397)
Transfer RNA biogenesis [BR:
tasp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
36615549 (TrAFT101_004397)
Prokaryotic type
36615549 (TrAFT101_004397)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
36615549
NCBI-ProteinID:
XP_024765806
LinkDB
All DBs
Position
2:join(6340442..6340605,6340668..6342161,6342231..6342402)
Genome browser
AA seq
609 aa
AA seq
DB search
MAAGDEAPVAASAPSTERNEDKPMASGEAAGAHQGSGNNRGKKGKKGDRGRGEWSRTKVD
KRKRHDEYKEYKRRKISDIDNPKANPFSKEEIEAESRRPKRKVAVMIGYAGTGYKGMQLN
GDEETIERDLFQAFIKAGAISKANADDPRKSSLARCARTDKGVHAAGNVISLKLIIEDED
IVDKINDALPPQIRVWGIQRTNNSYNCYQYCDSRWYEYLMPSYCLLPPHPQSFLGKKLVE
INKEYGAEEETNARLADVKDFWSEVDEKDIKPILAGLDDETRAAVLESLHSEQAPEENAD
ESKKAESTEPAAAREETAKEDDDYVMVDKEQPSAENAEPAPTNEGDDATPQRPAVVLETV
QPKRRELGPVDFALRDIKAAYIGAKRAYRVSPERIQRLQEALNQYVGTNNFHNYTVQKSH
GDPSSKRHIRSFVVNPKPIIIGDTEWLSLKVHGQSFMMHQIRKMVGLVTLMVRCGTTLDR
IKQSYGPQKMAIPKMPGLGLLLERPVFENYNKRAKETLGREDIDFDRYEEKLEAFKQEQI
YSRIFGVEEKENSFHSFFSQIDQFRSNHFLWLTAGGMKVATIDKSNGKLQDVDKQLGDED
EEDPEGGEG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcgacgaggctcctgtcgctgctagcgcgccctccactgagcgcaacgag
gacaagccaatggcatcaggcgaggctgccggcgcccaccagggctctgggaacaaccgc
ggcaagaagggaaagaaaggcgacagaggccgaggagaatggagccgcacaaaggtagat
aagcgaaagcgccatgacgagtacaaggaatacaagcgccgcaagattagcgacatcgat
aatcccaaggcgaaccccttctccaaagaggagattgaggcggagagccgtcggccgaag
cgcaaggttgccgtcatgattggctatgccggcactggatacaagggtatgcagctgaac
ggcgacgaggagacgatcgagcgagatctgttccaggcgttcatcaaggccggcgccatt
tcaaaggccaatgccgacgaccctcgcaagtcgagcttggctcgttgcgcgcgaaccgac
aagggcgtgcatgctgctggcaacgtcatcagtctgaagctgattatcgaagacgaggac
atcgtcgacaagatcaacgatgctctcccgccgcagatccgagtctggggcatccagagg
accaacaacagctacaactgctaccagtactgtgactcgagatggtatgagtatctcatg
cccagctactgtcttctgccccctcaccctcagagcttcctcggaaaaaagcttgttgaa
atcaacaaagagtacggcgctgaggaagagaccaacgcaaggctggctgatgtcaaggat
ttctggtcggaagtggatgagaaggatattaagcccatcttggccggacttgatgacgag
acgagggccgccgttttggagagtttacattccgaacaggcccccgaagagaatgcagac
gagtctaaaaaggctgagagcacagaaccagcggctgctcgggaggagacggcaaaagaa
gatgatgactatgtcatggttgacaaggagcagccatcagcagaaaatgccgaacctgcc
cccacgaatgagggtgacgatgctacacctcaaaggcctgcagtcgtccttgagacggtt
cagcccaagcgccgcgagctgggtcctgtagactttgccctgcgcgacatcaaggcagcg
tacattggcgctaagcgtgcatatcgcgtgtctcccgagcgcatccagcgactgcaggaa
gccctcaaccagtacgtgggaaccaacaacttccacaactataccgtgcaaaagtcgcac
ggcgacccttcgtcgaagcgacatatccgatcctttgtcgtcaatcccaagcccatcatc
atcggcgatacggagtggctgtcgctcaaggtccacggccagagcttcatgatgcaccag
atccgaaagatggtcggcttggtgactctgatggtgcgctgcggcacgactctggaccgc
atcaagcagagctatggtcctcagaagatggccattcctaagatgcccggcctgggcctg
ctgctggagcgaccggtgtttgagaactacaacaagagggcgaaggagacgctcgggcgt
gaggacattgactttgacagatatgaggagaagctggaagcgtttaagcaggagcagatt
tactcgcgcatctttggcgtcgaggagaaggagaattcattccacagcttcttttcacag
attgatcaattcagatcaaatcacttcctgtggctcactgccggaggcatgaaggttgcg
acgattgacaagtcgaacggtaagctgcaagacgtcgataagcagcttggtgacgaggat
gaggaggatcctgaaggcggggagggctaa
DBGET
integrated database retrieval system
