Trichoderma asperellum: 36615626
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Entry
36615626 CDS
T10296
Symbol
TrAFT101_003944
Name
(RefSeq) uncharacterized protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
tasp Trichoderma asperellum
Pathway
tasp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
36615626 (TrAFT101_003944)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
36615626 (TrAFT101_003944)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
36615626 (TrAFT101_003944)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_26
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
36615626
NCBI-ProteinID:
XP_065983137
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All DBs
Position
2:complement(join(4981704..4984064,4984137..4984294,4984397..4984828,4985301..4985316))
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AA seq
988 aa
AA seq
DB search
MGRNRVVSFMSQFSSGRKTPTSPSSTPPSDESPLSKDLKTKVKKRHSLAHITLRSPPTPP
PQSDYGTPVNTVDINTVDINNIDPPRRNRNSTSRNSARPMSMIQTYQPMVMEVNQDTIPE
LQPIFSLLNSHSNKLYHEGYFLKLDDQNTQGKPNPDRTWSECFAQLVGTVLSLWDAAELD
AAGEDGEVLPKFINLTDASLKVIDSLPTRSSDEQPLRNILSLSTAGRNRYLLHFTSHDSL
VQWTSAVRLAMYEHAALQEAYTGALIAGKAKFLNNINVMMERSKVTIGAWVRVRFGAGVP
WRRCWCVITPPNEKEYNKLQKELKKKAPYERSHARIVRGDIKFYDVKTEGKKQKRTKPVA
SISEAYSAYAIYPQAKSLVDASTLIKIEGNISIHSTPASSSEGFVFIMPETRPAVSGFET
MLRFLFPTWDTFGLYGRPGRIVASVLDARSLMFAMPKHKKYGYLELQDVVTLLLDEKSSS
WDEREWRKRLKDATGTRMNSIEDGSRSYSPSSNSNRASARLSYNNKPRAVGFAGDDLRNS
SDSNSPISTGSSSSPNDQSPLEMAARVGSSSSDEGRAVTPNGYVEPIESSNGAIRTPEPV
VRPPVINRNPQDRPANAPYHSPDLRRANNRLSQGTLAQMAKAGGIALPGVPDIPDDEDEE
SYHTAPPPPVPVHGGDGTTFYTNENRSAQSLNPPPSHYSHHSHHSHHSYQDNDRPPTGYS
NRSNQRQASPYGPRVPYSHDDYDQRPSTGDAYHGQRPLPPPHTTSYPNDRYGAYSPNGGS
PGYRQGHPQRKPLPMRPVSYDNKHQSITPNDIIDHYTTQSRAQYDGFLPPQPPMHLEFGD
ELQQPFVDRPRAGVLKTVGGADPDAHYSPGFDMAAVNFGPTVNYGAPSVLRKPAPPTAQV
PPPPRTPTEPASHRRQDSATMPWQPAAASPSSQRSHGLTPQQYVQHRASIASAPYGHGRT
ISANSLGSMMAPGQPGGYPQSVSNMQQY
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaatcgagttgtctcgttcatgtcccaattttcctctgggcgcaagacaccg
acatctccttcgtcaacgcctccctcggacgagtctcccttgtccaaggatttaaaaacc
aaggtcaagaagcgtcactcgctcgcgcatatcacactgcgcagccctcccacgccgccg
ccgcagtcggactatggcactccagtaaacaccgtcgacatcaacaccgtcgacatcaac
aacattgaccctccccgccgcaaccgaaatagcacgtcgcggaatagcgcacgacccatg
tccatgatacagacctatcagccgatggtcatggaggtcaaccaggacacgattccggag
ctgcagcccatcttctcgctgctcaacagccactccaacaagctgtaccacgagggctat
ttcttgaagctggatgaccagaacacacagggcaagccgaatcccgacagaacatggtct
gaatgctttgcgcagcttgtcgggactgtgctctccttgtgggatgccgcagaactggat
gctgccggtgaagatggcgaggttcttcccaaattcattaatctcacagatgcctcactc
aaagtgatcgactctctgccaacccgatcaagcgatgagcagcctttgcgaaatattctc
agcctttccaccgctggcaggaatcggtacttgctgcatttcacttctcatgactcactt
gtccaatggacatcggctgttcgattggccatgtatgagcacgcagcccttcaggaagcc
tatactggcgccctgatcgctggcaaggccaaatttctcaacaacatcaacgtgatgatg
gagaggtccaaagttacgataggggcatgggtcagagttcgattcggagctggcgtgcca
tggagacgctgctggtgtgtcatcacgccacctaacgaaaaggagtacaacaagcttcaa
aaagagctgaagaaaaaggctccctacgagcgatctcatgctcgcatcgtcaggggggat
atcaaattctacgatgtcaaaaccgaaggcaagaagcaaaagaggacaaagcccgtcgcc
tccatcagcgaggcctactctgcctatgcaatctacccccaagccaagtcactggtagat
gcttccactctcatcaagattgaaggtaacatttcaattcattctactccagcgtcatcc
tccgaaggatttgttttcatcatgcccgagacccgtcctgctgtcagcggcttcgagaca
atgcttcgcttcttgttcccgacctgggatacttttggtctgtacggccgcccaggcaga
attgttgctagcgtgctggatgctaggtcgctcatgtttgctatgcccaagcacaagaag
tacggctacttggagctgcaggatgttgtgacgctgttgcttgatgaaaagagttcgagc
tgggatgagagggagtggcgaaagcgtctcaaggatgccaccggcacgcggatgaactcg
attgaagatggaagccgatcttattctccctcttcaaactcaaacagagccagcgctaga
ctgagctacaacaacaagcccagagcagtagggttcgccggcgatgatttgcggaattct
tcggactcaaatagcccaatatcgacgggctccagctcttcgccaaatgatcagtccccc
ctggaaatggctgcgcgagtaggaagctcaagctcagatgagggccgggcagtcacgccg
aatggctatgtcgagcccattgagagcagcaatggagctatccgcacgccggaacctgtc
gttcgacccccggtcatcaaccgtaatcctcaggatcgcccggccaacgcaccttatcat
tcacccgacctccgacgagccaacaaccgcctgtcccaaggcaccctggcccaaatggcc
aaggctggcggaattgctctgccaggagttcccgatatcccagatgacgaagatgaagag
tcctatcatacggcgccaccaccaccagttccggtccatggtggcgatggtaccacattt
tataccaacgagaaccgatctgctcagtccttgaacccaccgccaagtcactacagccac
cacagccaccacagtcaccatagctaccaagacaacgaccgcccgcctaccggctactct
aaccgatctaatcagcgacaggcatccccatatggaccgagagtgccttactcgcatgat
gactatgaccagaggccgtccacgggagatgcttatcatggccagcgcccactgccacct
cctcatactacatcctacccaaatgatcggtatggtgcctactctccaaatggtggctct
cccggatatcggcagggacaccctcagcgaaaaccccttcccatgagaccggtctcttat
gataataaacatcagagtatcactccaaacgacatcattgatcattatactacccaatct
cgagctcaatacgacggctttctccctcctcagccaccgatgcatctcgagtttggcgac
gagctccagcaaccttttgtggaccggccacgcgcgggtgttttaaagacggtcggcggt
gctgatccggacgctcactattctcccggcttcgatatggccgccgtcaactttggacca
acagtcaattatggtgccccttcggtgcttcgcaagcctgccccccctacagcgcaagta
ccaccaccgccgaggacaccgacagagcctgctagccacaggaggcaagactccgcaacc
atgccatggcagcctgctgcggcttcgcccagctctcagcgatcccatggcctcactccc
cagcaatacgttcagcaccgagcctctattgcctcggcaccgtacggacacgggagaacc
atctcagccaactccctaggctccatgatggcaccgggccagcctggtggatacccacaa
tcagtgtctaatatgcagcaatattaa
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