Trichoderma asperellum: 36616528
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Entry
36616528 CDS
T10296
Symbol
DBP5, TrAFT101_006018
Name
(RefSeq) RNA helicase required for poly(A+) mRNA export
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tasp Trichoderma asperellum
Pathway
tasp03013
Nucleocytoplasmic transport
tasp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
36616528 (DBP5)
03015 mRNA surveillance pathway
36616528 (DBP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
36616528 (DBP5)
Enzymes [BR:
tasp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
36616528 (DBP5)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
36616528 (DBP5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-GeneID:
36616528
NCBI-ProteinID:
XP_024760542
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All DBs
Position
3:join(4344499..4344764,4344826..4345311,4345375..4345612,4345671..4346162)
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AA seq
493 aa
AA seq
DB search
MSDLASRITKPDEPAKTTDWAESVEAEETKQQPEADAGAAEVQVDGAVEELGGSGLHEPD
WDVEVSLSDLQANEATPFHSATQWQDMGLSEDLLKGLLALKFLKPSKVQGKSLPLMLSDP
PRNMMAQSQSGTGKTAAFVTAILSRVDFTKPDQPQALALAPSRELARQIEGVINAIGRFI
EPLKVAAAIPGALPRDQPVRSAVIVGTPGTVQDIIRRRQLDVSQLKVLVLDEADNMLDQQ
GMGDQCLRVKNLLPKTVQILLFSATFPDKVGAYAMKFAPNAHSLKLQRSELTVKGISQMF
IDCADDNIKYDVLCKLYGLMTIGQSVIFVKTRESANEIQRRMVADGHKVSALHAAFDGNE
RDELLNKFRQGENKVLITTNVLARGIDVSTVSMVINYDIPMKGRGDSEPDAETYLHRIGR
TGRFGRVGVSISFVYDKKSYDALLGIANTYGIDLVRLDTDDWDEAEERVKEVIKKNRAQA
AYAPSATDNAKAS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacctcgcgagccgtattacgaagcctgacgagccggccaagactactgattgg
gctgaatctgttgaggcagaggaaactaagcagcagccagaagctgatgctggcgctgcc
gaggttcaggttgacggtgctgttgaagagctcggtggctctggtctgcatgaacctgac
tgggatgttgaagtctctctcagcgatctccaggccaacgaagcaactcctttccactct
gctacacaatggcaggacatgggactttcggaggacctcctcaagggcctcttggctctc
aagttcttgaaaccttcaaaagtccaggggaaatcgcttcctctaatgcttagcgatcct
ccgagaaatatgatggcccaatcccaatctggtactggaaagacggcggcgtttgttact
gccattctttcgcgtgtcgactttaccaagccggatcagcctcaagcccttgccttggcg
cccagcagagaactggctcgtcagattgagggtgttataaacgctattggtcgctttatt
gaacctctcaaggttgctgcagctatccctggtgctctgcctcgcgaccagccagttcga
tccgctgttatagttggcacccctggtactgtccaggacattatcagacgaagacagttg
gatgtttctcaactgaaggtcctcgtcttggacgaagccgacaacatgctggatcagcaa
ggaatgggtgaccagtgcctgagagtaaagaacctgctgccgaagactgtgcagattctt
ctcttctcagccactttccccgacaaagtcggtgcatatgccatgaagtttgcgccgaat
gcccattctctcaagctacagcgaagcgagcttacagtcaagggcatttcacaaatgttc
atcgactgcgcggacgacaacatcaagtacgacgtcctttgcaagctttacggtcttatg
accattggacaatcggttatctttgtcaagacccgtgaaagcgccaacgagatccagaga
cgtatggtggctgatggacacaaagtatctgctctgcacgctgcgtttgatggtaatgag
agagacgagctgctgaacaagttccgacaaggcgagaacaaggttctcatcaccaccaat
gtcctcgcccgtggtattgacgtgtcgaccgtatccatggtcatcaactacgatatcccc
atgaaaggccgaggcgatagtgagccagacgccgagacttacctccaccgtattggtcga
actggacgttttggccgcgttggtgtcagtatcagtttcgtctatgacaaaaagagctac
gatgccctcctcggcattgccaacacatatggcattgatctcgtacgtcttgacaccgat
gactgggatgaggcggaggagcgtgtcaaggaagtcatcaagaagaacagagctcaggct
gcatatgccccgagcgctacggataacgccaaggcatcctag
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