Trichoderma asperellum: 36617952
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Entry
36617952 CDS
T10296
Symbol
TrAFT101_001833
Name
(RefSeq) uncharacterized protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
tasp Trichoderma asperellum
Pathway
tasp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
36617952 (TrAFT101_001833)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
36617952 (TrAFT101_001833)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
36617952 (TrAFT101_001833)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
36617952
NCBI-ProteinID:
XP_024762954
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Position
1:join(5898945..5899482,5899553..5899809)
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AA seq
264 aa
AA seq
DB search
MSTIPASALQSGSPPTIPLPFNAKQPEKVTLYPLSNYTFGVKETQPEEDPSVIARLKRLE
EHFSEHGMRRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLKPEDDEVEGFKARLDER
LAPVGRLGEGEEAGDWEVGECLAQWWRPNFETFMYPFVPAHVTRPKECKKFYFIQLPKSK
VLSVPKNMKLLAVPLFELYDNTARYGPQLSAIPHILSRYNFEFVDENGDVVAATPGSGAP
DGYVPKAKVLAGDDTDMVEENGTH
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccatcccggcctcggccctccaatcggggtctccgcccacgatcccgctgccg
ttcaatgccaaacagcctgagaaggttacgctatacccgctatccaactatacattcggt
gtgaaagaaacacagcctgaagaagatccgtccgtaattgcccgcctgaagcgcctagaa
gaacatttcagcgaacatggcatgcgccgaacatgcgaaggcatcctggtgtgtcatgaa
cataaccacccgcacatcctgatgctgcagatcgcaaacgcgttcttcaagctccctgga
gactatctgaagccagaggacgacgaggtcgaggggttcaaagctcgattggatgagaga
cttgcgccagtaggccgactaggcgagggagaagaggctggggactgggaggttggcgag
tgcctggcgcagtggtggaggccaaacttcgagaccttcatgtatccatttgtccctgcg
cacgtcacacggcccaaggagtgcaaaaaattctacttcattcagctaccgaagagcaag
gttctaagcgtgccaaagaatatgaagcttttagccgtccctttattcgagctttacgat
aacactgctagatatggaccgcagctgtctgccattcctcatatccttagtcgctacaac
tttgagtttgttgatgaaaatggcgacgtggttgctgcaacccctggttcaggcgccccc
gatggatatgtgcccaaagccaaggttctggccggagacgacacggatatggttgaggaa
aatgggacacattga
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