Trichoderma asperellum: 36618065
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Entry
36618065 CDS
T10296
Symbol
TrAFT101_010173
Name
(RefSeq) uncharacterized protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
tasp Trichoderma asperellum
Pathway
tasp03022
Basal transcription factors
tasp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
36618065 (TrAFT101_010173)
09124 Replication and repair
03420 Nucleotide excision repair
36618065 (TrAFT101_010173)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tasp03021
]
36618065 (TrAFT101_010173)
03400 DNA repair and recombination proteins [BR:
tasp03400
]
36618065 (TrAFT101_010173)
Transcription machinery [BR:
tasp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
36618065 (TrAFT101_010173)
DNA repair and recombination proteins [BR:
tasp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
36618065 (TrAFT101_010173)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
36618065
NCBI-ProteinID:
XP_024760883
LinkDB
All DBs
Position
6:join(2186704..2186842,2186895..2188681)
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AA seq
641 aa
AA seq
DB search
MASPTGHTLFKKKEGTLSFSSDHGAITWTPASGGPATVSLPITNITNLQQTPDSSPKVML
KIFEKSESGNDPVTYLFHFNTQEAKSEAQAVKDLLSRLLADLRSTDANVSKLGAATGAPA
NGDGSASASATLGSSNGINSQSMSPKWFDDNQLKMNIELQQSLMKKDKSLHQTYMSAIST
KPDSMTSAAFNSQFWSMRINLLRAHAIEINQKKGAYNVLSTVKPRTVDGELKLNISVEQV
QMIFAQHPLIKRIYNETVPRLSEAEFWSRFFLSKLAKRLKGERVTDNDPADAIFDKYNAD
GNTFDAQAKIMSQPVPHIIDIEGNEENQGGFKGGNAKDVEMRPRANIPIVRTLNNLSEKI
MANVPPSDSTAIDSKGLYDTSRELILRDLRGEGEEQRIMLSIKERNNFFSSKDSPSLKNR
DIVENQQPSEILTKMQNLYAAGNDKTGDNGLQINIELELDSDSDKETKPGLNTARGAIKE
AEKDVMAGIHQQRSQKYGGASDDTSPMGIPPQISDKSALTHATTIEFLHQFWDGFLSGDP
DRAMEVQYLAESLARSTTRIQAVADEAEAERDIIIQKRKQEIRSHFERTGKKIRWKPDMV
GGGRDAVSKIMQPTLDALRRAQDSYSKALGEENIQISTENT
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggccagtccaacgggccacactcttttcaagaagaaagagggcaccctgtccttcagc
agtgatcatggagcgataacttggacaccagcatcaggaggtcctgcaacggtctcacta
ccaattaccaacataactaatcttcagcaaacccccgacagctctccgaaggttatgctt
aaaatattcgaaaagtccgagagcggaaacgaccccgtcacatatttattccatttcaac
acccaggaagctaaatcagaggcccaagcagtcaaagatctactttcccgacttttggct
gatctcagaagcaccgatgcaaatgtgtccaagctaggtgctgcgactggagcgcctgca
aatggcgatggctcagcaagcgcctctgccactctaggatcctccaatggcataaattca
caatcaatgtctccaaaatggttcgatgataaccagctgaaaatgaatattgagctacag
caatctctcatgaaaaaagacaagagcctgcatcaaacctacatgagcgctatatcgact
aagccagattcaatgaccagcgccgccttcaactcccaattctggtccatgagaataaat
ctgctaagagctcatgctattgaaatcaaccagaaaaagggggcatataatgttctttct
actgttaaacctcggaccgttgacggagaattaaaattaaacatcagcgtcgagcaggtc
caaatgatctttgctcagcatccgttaatcaagcgaatttacaatgaaaccgtaccgaga
ctctctgaggccgaattctggtcgcgattcttcctcagcaagctagccaagagactcaaa
ggggaacgcgtcaccgataacgaccctgcagatgctatcttcgacaagtacaatgctgat
ggcaatacgtttgatgctcaagcgaaaattatgagccaacctgttcctcacataatcgac
attgagggtaatgaggagaaccagggaggattcaaaggaggcaacgccaaggatgtcgag
atgcgacctcgagctaatatccccattgtcaggacgctcaataacttgagcgagaaaatc
atggcaaatgttcctccctcggatagcactgccattgattcaaagggactttacgacacg
tcccgagaactaattctacgagatttaaggggagagggggaggaacaacggatcatgctc
agtatcaaagagaggaataattttttctcatcaaaagattccccatcgctaaaaaataga
gatatcgtcgagaatcagcagcctagcgaaattcttaccaaaatgcaaaatctatatgca
gccgggaatgataagactggagacaatgggcttcaaattaacatagaactcgagttagat
agtgatagcgacaaagagacgaagcctgggctcaatactgctcgtggtgcaatcaaagag
gcagaaaaggatgtcatggctggcatacaccaacaacgctcccagaaatacggaggcgcc
tcagatgatacctctccgatgggaattcccccccaaatttccgacaaatccgctcttact
catgccacaaccattgaatttcttcaccaattttgggatggttttctttctggcgaccct
gaccgggcgatggaggtccaatatttggctgaatcactagcaagatccacgacgcgcatc
caggctgtagctgacgaggctgaggccgaacgcgacattattattcagaaacgcaagcag
gagatccgtagccacttcgagcgcacagggaagaaaatccggtggaagccagacatggtg
ggcggtggtcgtgatgctgtctccaaaataatgcagccaacgttggatgcactacgacga
gcacaggactcttattccaaggcattaggagaagaaaacattcaaatatcgacggagaac
acgtaa
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