Trichoderma asperellum: 36618342
Help
Entry
36618342 CDS
T10296
Symbol
PRP5, TrAFT101_007597
Name
(RefSeq) pre-mRNA processing RNA-helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tasp Trichoderma asperellum
Pathway
tasp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
36618342 (PRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tasp03041
]
36618342 (PRP5)
Enzymes [BR:
tasp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
36618342 (PRP5)
Spliceosome [BR:
tasp03041
]
Complex A
U2 snRNP components
U2 related factors
36618342 (PRP5)
Complex B
36618342 (PRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
36618342
NCBI-ProteinID:
XP_065984211
LinkDB
All DBs
Position
4:join(3694053..3694205,3694290..3695103,3695161..3697862)
Genome browser
AA seq
1222 aa
AA seq
DB search
MARPRDSRSPSPAGSHYNSRRHRKDDDRRDARDRRDDGRDPRRRSRSRSPDYRYRDRDRG
RDNRDRGGRDRDRDRDNFRRRDRSLDRRDDDFYRGGPRDRRGARSRERLPPRARSPDRRR
DRSRDDYRRRDDSRNRSRREGTADSHNRSSRADSRSRKSPVADSGRNGVDEVRFLAMDKE
TRAHDISQAQKAKSNATQPEVDKKAERLAKLEAWKKKKELEGQKQKEVNASQTRNLLAEM
DKKAKEGSTAAPSPVVSSAASPTPVDSGSASPAKPYLGKFDPKTIAKKSASHQKSNDSTK
GALGSIDIQPGSIPAPVKQAPTASALPTNRAKTSSFGFGKSHAEGDKFTSKRKLDLDEEV
TTKRQLTKLPTLPTEADDTPYADQDEDDESDGDNFAENEEEAAAAARAAHERRLQAENQA
ENPAENQADEEMKDAEPQTAEQTNGEHATNGETFSKPPAESMEVDEEDEEIDPLEAFMDD
LKQAETTKNPPKKASVTKKKQEPEAYFSEDDYAFEDQADPNADALLTIASKRKKKDIPSV
DYSKIDLQPIRKNFWVEPAELNSLSEADVADLRLELDGIKVNGKDVPKPVQKWAQCGLTR
QTLDVISSLGFEKPTPIQMQALPSLMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPLR
DTDGPIGLIMTPTRELATQIHRDCKPFLKMMNLRAVCAYGGAPIRDQIAELKRGAEIIVC
TPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTILFSA
TMPRLIDSLTKKVLKSPIEITVGGRSVVAKEIEQIVEIREESTKFVRVLELLGELYDKDE
DARSLIFVERQEKADDLLKELMQKGYPCMSIHGGKDQVDRDSTISDFKKGVVPILIATSV
AARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTPEQENCAPGIAKAL
EQSDQPVPERLNEMRKSHREKVKSGKAKDSSGFGGKGLDRLDQEREAARLRERKTHRAEG
EEEEVKEEGKKEEDDKKIEKTLNAIKAAASTVQSRESAKADTGDGGASKAAQPAAATADK
AKDPLDKVSSAVSAINSRLGKAGQLRSGQPIDNKGPDAGAFHATLEINDFPQKARWAVTN
RTNVAKILEATGTSITTKGSFYPPGKEVPPGGEPKLYILIEGDTELVVAGALNEMTRLLR
EGTIAAADADSRAPASGRYTVT
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggctcggccaagagactcgcgctcaccaagtcctgcaggcagccattacaactcgcgc
cgccaccggaaagatgacgaccggcgggatgccagagaccgccgagacgatggaagggac
cctcgccggcgctcaaggtcgcgcagcccggattatcgataccgcgaccgcgaccgaggc
agagacaacagagaccgcggtggccgtgaccgcgatcgcgaccgtgataactttcgccga
cgagaccgctccttagatcgccgagacgatgatttttaccgcggaggtccacgcgatcgc
cgtggcgccagatcaagagagagactcccacccagggcccgctcgcctgaccgaagacgg
gaccgcagcagagatgactataggaggcgagacgactctagaaacagaagccgtcgtgag
ggtacggctgactctcacaatcgcagcagccgtgccgatagccggtctcgaaagagtcca
gtggccgacagtggcaggaatggagttgatgaggtacgttttctggccatggataaggaa
actagagctcatgacatatcacaggctcaaaaggccaaatcgaatgccacacagcctgag
gtcgataagaaggcagagcgattagccaagcttgaagcatggaaaaagaagaaggagctc
gaaggccagaagcagaaagaagtgaatgctagccagacgagaaatcttcttgctgagatg
gacaaaaaagccaaagagggatcgacagctgcgccatcgcctgttgtatcgtcggcagct
tcgccgacccctgttgactcgggcagcgcatctccagcaaagccttatctcggcaagttt
gatccaaaaacgattgcaaagaagtctgccagtcatcaaaagtcaaatgattcaactaaa
ggcgctttgggatctatagatattcagccaggcagcattcccgcccctgttaaacaagca
cctactgcatccgcgctacccacaaatcgcgccaagactagcagttttggatttggcaag
tctcatgctgagggagacaagttcactagcaaacgaaagctggacctggatgaggaggtc
acaaccaaacgacaactgaccaaactccctactctccccacagaagcggatgatactcct
tacgccgaccaggatgaggacgatgaatcggatggcgataattttgctgaaaatgaagaa
gaggctgccgctgctgctcgcgctgctcacgaaaggcgtcttcaagctgaaaaccaagca
gagaacccagcagagaaccaggctgatgaagagatgaaggatgccgaaccccaaaccgcg
gaacaaaccaatggtgaacatgccaccaatggagagaccttcagtaaacccccggcagaa
tctatggaggtcgatgaggaagacgaagaaatcgatcctctagaggcgtttatggatgac
ctcaaacaggcagagaccacgaagaatcccccgaagaaggcatctgtgaccaaaaagaag
caggagcctgaggcgtatttctcggaggatgattatgctttcgaagatcaggcggacccg
aatgcagatgccctgcttaccattgcgagtaaacgcaagaagaaggatattccaagcgtt
gactactccaagattgacttgcagcctattcgcaagaatttctgggttgagcctgcagag
ctgaattcactttctgaagcggatgtcgccgatttacgattggagctggatggaatcaag
gtcaatggcaaagacgtccccaagcccgttcagaaatgggcccagtgtggacttactcgt
caaacccttgatgtcattagctcacttggatttgaaaagcctacgccaattcagatgcag
gctcttccctcgttgatgtctggtcgagacgtcgtcggtgtggcgaagacaggatctggc
aagactatggctttcttgcttcccatgttccgacatatcaaggatcaagagccgctcagg
gataccgatggtcctattgggcttattatgacgccaacgcgagagctcgccacgcaaatt
cacagagattgcaagcccttcttgaagatgatgaacctacgtgccgtctgcgcgtacgga
ggagctcccatcagagatcagattgctgagctcaagcgcggtgccgaaatcattgtctgt
acccctggtcgtatgattgatcttttggctgcgaatcaaggaagagtcaccaacctcagg
cgagtgacctatgtggttctcgatgaagccgatcgaatgtttgacatgggtttcgagcca
caagtaatgaagatctttgccaacatgcgacctgatagacaaacaattctattttcagct
accatgccacgcctcatcgactcactgaccaagaaagtgctgaagagccccattgaaatt
accgtgggtggtcgcagcgtcgtcgccaaggagattgagcaaattgtggagatcagagag
gagagcacaaagttcgtccgtgttctggagctgctaggcgagctctatgacaaggatgag
gatgctcgctcgctaatctttgtggagcgacaggagaaggcggatgatctactcaaggag
ttaatgcaaaagggctatccttgcatgtccattcacggaggcaaagaccaagtcgatcgt
gactctaccatttcagatttcaagaaaggcgtggtgccgatcctaattgccacgtcagtc
gccgctcgtggcttggacgtcaagcagctcaagctcgttatcaattacgacgcacctaac
cacttggaagattatgtccaccgagccggacgaacgggccgtgcaggaaatacgggaaca
gcagtcacatttgtaacccctgaacaagagaattgcgcacctggtattgccaaagccttg
gaacaaagtgaccaacctgtcccagaaaggctcaatgagatgcgaaagtctcatcgtgag
aaggtcaagtcgggcaaggcaaaggactcttccggctttggcggaaagggtctggaccgt
ctagaccaggaacgcgaggcagctcgtcttcgagaacgtaagacacatagagctgagggt
gaagaagaagaggttaaagaagagggcaagaaagaggaggatgacaagaagatcgaaaag
acacttaacgccatcaaagctgcggcctcgaccgttcagtctcgcgaatctgccaaagcc
gacacaggagacggcggcgcaagcaaagcagcgcaacccgccgccgccacagccgacaag
gccaaggatcccctggataaggttagctctgctgtcagtgccatcaacagccgtctcggc
aaagctggtcagcttcgctcaggccaacccatcgacaacaagggtccggacgctggtgct
ttccacgccacgctggaaatcaacgacttcccccagaaagccagatgggctgttaccaat
cgtacaaacgtggctaagattttggaggcgactggaacgtctattacgaccaagggcagc
ttctatcctcccggcaaagaagtgccacctggaggagaacccaagctgtatattcttatt
gaaggtgatactgagcttgtggtggcgggtgctttgaatgagatgaccaggcttctgaga
gaaggtaccattgctgctgcggatgcggatagcagagcgccggcgagcggaagatacact
gtcacttag
DBGET
integrated database retrieval system
