KEGG   Trichoderma asperellum: 36618816
Entry
36618816          CDS       T10296                                 
Symbol
TrAFT101_003409
Name
(RefSeq) uncharacterized protein
  KO
K12880  THO complex subunit 3
Organism
tasp  Trichoderma asperellum
Pathway
tasp03013  Nucleocytoplasmic transport
tasp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tasp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    36618816 (TrAFT101_003409)
  09122 Translation
   03013 Nucleocytoplasmic transport
    36618816 (TrAFT101_003409)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tasp03019]
    36618816 (TrAFT101_003409)
   03041 Spliceosome [BR:tasp03041]
    36618816 (TrAFT101_003409)
Messenger RNA biogenesis [BR:tasp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     36618816 (TrAFT101_003409)
Spliceosome [BR:tasp03041]
 Complex C
  Other components
   EJC/TREX
    36618816 (TrAFT101_003409)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    36618816 (TrAFT101_003409)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WDR55 WD40_Gbeta Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_SCAP Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_2nd CFAP251_N DSE1_N Beta-prop_VPS8 KNTC1_N TP_0598_N Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Ras
Other DBs
NCBI-GeneID: 36618816
NCBI-ProteinID: XP_024766834
LinkDB
Position
2:join(3351319..3351440,3351491..3351564,3351625..3351863,3351942..3352308,3352392..3352436,3352572..3352735)
AA seq 336 aa
MAPILRPRVNLSKDRFPEYFNSLRSQPYTDPNSSRAAGPLNLRSIAWNPPGTLVATGSAD
RTLRVWNPEKPNVKFSTELKGHAAGIEKVAFNPTKDAELCSLSSDGVVRFWDVRTKACFN
EVTDLGDAMTLVWAPDGQTLLVGNRSDNIFVLSPTQKTPLASHQQMVQTNQIAFCWSGKK
IFVTTSEGQIRILSYPEFEPVLHLGDGDNATEFTLKGHTASCLAAELQPMGRYLATGGSN
SIISLWDTTDWLCQRTITRMTGPVRSISFTFDGSYVVGGSDEGNGLEVTHVETGEHVHTF
KTAGSCPVVAWAPTRYCLAYSDLGVLRIVGVDLDRK
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggcaccaattttgagaccgcgagtgaacctatccaaagatagattcccagagtacttt
aatagcttgaggagtcagccatacacggacccaaattcatcaagggcggctgggcctttg
aatttaagatcgattgcatggaaccctcctggaactctagttgctactggctcggcagat
aggactttacgagtctggaatccagagaagcctaatgtcaagttttcaacagagctcaag
ggtcacgcagcagggatcgaaaaagtcgcgttcaatcccacaaaggacgcagagttgtgc
agtttgagcagcgatggcgtggtgaggttttgggatgtccggactaaggcttgtttcaat
gaagtcactgatcttggtgatgccatgacgcttgtctgggccccggatgggcagacgttg
cttgtaggaaacaggtcggataatatctttgtcttatcgccgacgcaaaaaactcccttg
gcctcacatcaacaaatggtacagacaaatcaaatcgccttctgctggagtggcaagaag
atattcgtcactacatcggaaggacagattcggattctctcttaccctgagttcgaaccg
gtgctgcacctgggagatggcgacaacgctacggagtttacgctcaagggtcataccgcg
tcatgcctggccgccgagttgcagccgatgggcaggtatcttgccacaggaggatccaac
tccattatttcattatgggacactacggactggctatgtcaaaggacgattacaaggatg
acaggccccgtaaggagcataagtttcacgtttgatggaagttatgtcgttggcggcagt
gatgaaggcaacggacttgaagtgacgcatgtcgagacgggggaacacgtccatactttc
aagacggccggctcatgcccggtggtggcttgggcaccgacccgctactgtttggcgtat
agcgatcttggagtcttgcgaattgtgggggtagatctcgacagaaagtaa

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