KEGG   Trichoderma asperellum: 36618852
Entry
36618852          CDS       T10296                                 
Symbol
RPB2, TrAFT101_002500
Name
(RefSeq) DNA-dependent RNA polymerase II
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
tasp  Trichoderma asperellum
Pathway
tasp03020  RNA polymerase
tasp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tasp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    36618852 (RPB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    36618852 (RPB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tasp03021]
    36618852 (RPB2)
   03400 DNA repair and recombination proteins [BR:tasp03400]
    36618852 (RPB2)
Enzymes [BR:tasp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     36618852 (RPB2)
Transcription machinery [BR:tasp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     36618852 (RPB2)
DNA repair and recombination proteins [BR:tasp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      36618852 (RPB2)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_5 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4
Other DBs
NCBI-GeneID: 36618852
NCBI-ProteinID: XP_024763611
LinkDB
Position
2:join(555690..558083,558163..559391,559453..559615)
AA seq 1261 aa
MADYEDDYDYENYGDEDEGITPEDCWTVISSFFETKGLVSQQTDSFDEFTQTTIQDLVNE
YSTITLDQPNPPSPPGRTIALRRYEIKFGSVMVSRPTISETDGTVTSLLPYECRDRNLTY
ASPLYIKITKKVSAAVEREVPLHEMDDAQQEQYARTGEHPTKLEWEEEENGEDDNLGKSD
DWKDMVFVGKLPIMVKSKICHLSREQDDSLFLVNECPYDQGGYFVINGSEKVLIAQERSA
ANIVQVFKKAQPSAYTYTAEIRSALEKGSRLISSMMLKLYGKGDSARGGFGQTIHTTLPF
VKSDLPVAIVFRALGVVSDEDILNHICYDRNDSQMLEMLRPCIEEAFCVQDREVALDFIG
KRGNRDQAGLGREKRVRVAKDILQKETLPHISQTEGSETRKAFFLGYMVHKLLQCALGRR
EPDDRDHFGKKRLDLAGPLLAKLFRGIMRRMNTELANYLRRCVEGNRHFNLAVGIKPGTL
SNGLKYSLATGNWGDQKKAMSSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLAKPRQ
LHNTHWGLVCPAETPEGQACGLVKNLSLMCYVSVGSPSEPLIEFMINRGMEVVEEYEPLR
YPHATKIFVNGVWVGIHQDPKHLVNQVLDTRRKSYLQYEVSLIRDIRDQEFKIFSDAGRV
MRPVFTVQQEDDPETGINKGHLVLTKDLVNRLAKEQAEPPEDPSMKLGWEGLIRAGAVEY
LDAEEEETAMICMTPEDLELYRLQKAGIATDEDMGDDPNKRLKTKTNPTTHMYTHCEIHP
SMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGFFLTNYSRRMDTMANILYYPQKPLGT
TRSMEFLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGLFRSLFFRSYSDQEKK
VGLNYTEVFEKPFHQNTLRMKHGTYDKLDEDGIVAPGVRVSGEDIIIGKTAPIDPETQDL
GTRTTMHQRRDISTPLRSTENGIVDQVIVTVNADNVKYVKVRVRTTKIPQIGDKFASRHG
QKGTIGVTYRQEDMPFTREGLTPDIIINPHAIPSRMTIAHLIECLLSKVSTLEGMEGDAT
PFTDVTVDSVSELLRKHGYQSRGFEIMYNGHTGRKLRAQVFFGPTYYQRLRHMVDDKIHA
RARGPVQIMTRQPVEGRARDGGLRFGEMERDCMIAHGAASFLKERLFEVSDAFRVHICEI
CGLMTPIANLSKQSFECRPCKNKTKIAQIHIPYAAKLLFQELQSMNIAARMYTNRSGASI
R
NT seq 3786 nt   +upstreamnt  +downstreamnt
atggctgattacgaagacgattacgattatgagaactatggggatgaggatgagggcatc
acgcccgaggattgctggaccgtgatttcctctttcttcgagaccaagggtctcgtatcg
cagcagaccgactcctttgacgagtttactcagacgaccatccaggatctcgttaacgaa
tactccaccatcacactcgatcagcccaatcctccttcgccacctggtcgaacgatagcc
cttcgccgatatgaaatcaaatttggaagcgtcatggtatcacgccccactatcagcgaa
acagatggaactgtgacatctttgcttccttacgaatgccgagaccgtaacttgacctac
gccagtccgctctacatcaaaatcaccaaaaaggtgtctgcggctgtcgagagagaggtt
ccgctgcacgagatggacgatgcccagcaagaacagtatgcaaggaccggagagcaccct
acaaagttggaatgggaagaggaagaaaatggcgaagacgataatctcggcaagtctgac
gactggaaggacatggttttcgttggcaagctgcccatcatggtcaaatccaagatttgt
catctgagccgtgaacaggatgatagcctgttccttgtcaacgagtgcccgtacgaccaa
ggcggttatttcgtcatcaacggtagtgaaaaggtcctcatcgcccaagagcgctccgcc
gcaaacattgttcaggtcttcaagaaggcccagcccagtgcttatacctacacggccgaa
atccgaagtgcgctggaaaagggatctcgactcatctctagcatgatgctcaagttgtat
ggcaaaggagactctgcgcgaggtggttttggccagactattcacacaaccctgcctttc
gtcaagtcagatcttcccgtcgccattgttttccgtgccttgggtgtcgtttctgatgaa
gacattctgaatcacatttgctacgatcgaaacgacagccaaatgcttgaaatgcttcgg
ccttgtattgaagaagctttctgcgtccaggatcgagaggttgctctcgatttcatcggc
aagcgaggcaaccgtgatcaagctggcctaggtcgtgagaaacgtgttcgtgtagcgaag
gacattctccagaaggagacgcttccccacatttcccaaactgaaggcagcgagacgaga
aaggcattcttcctcggatacatggtgcacaagctattgcaatgcgcacttggaagacga
gagcccgatgaccgagatcacttcggaaagaagcgtctggatctggctggtccactgctg
gccaagctgttccgtggtatcatgcgtagaatgaataccgaattggccaactacctgaga
cgatgtgttgagggtaaccgccacttcaacctggctgttggcattaagcctggcacactc
tccaacggattgaagtattcactcgccaccggaaactggggtgaccagaagaaggcaatg
agctcaaccgcaggtgtatcacaggtgcttaaccgttacacttttgcttcgacactttct
catttgcgtcgtaccaatacacccatcggaagagatggtaagctggcgaagcctcgacag
cttcacaacacacactggggtttggtatgcccagccgagacccctgaaggacaggcttgt
ggtttggtcaaaaacttgtctctgatgtgctacgtcagtgtcggatctccttccgagccc
ttgatcgagtttatgatcaacagaggtatggaggtcgttgaggagtacgaaccgctgagg
tatccccatgcgacaaagatttttgtgaatggtgtctgggttggaatccaccaagacccc
aagcatctggtaaaccaagttttggacactcgtcgtaaatcctatctgcagtacgaagtc
tctctgatcagagatattcgtgaccaagaattcaaaatcttctctgacgccggtcgtgtt
atgcgtcctgtctttactgtacagcaagaggatgacccggaaacgggcatcaacaagggc
cacctggttttaaccaaggatcttgtcaatagactggccaaagagcaggctgagcctccg
gaagatccaagcatgaagcttggatgggaagggttaattcgggctggtgcggtggaatat
ctcgatgctgaggaagaagaaacggctatgatttgcatgacaccggaggatcttgagctt
taccgtcttcagaaggctggcattgccacagatgaagacatgggagacgatccaaacaag
cgtctcaagaccaagacaaatccgacaactcacatgtacacgcattgcgagattcacccg
agtatgatcttaggtatctgtgctagtatcattcctttccccgatcacaaccagtccccc
cgtaacacctaccaatctgccatgggtaaacaagccatgggcttcttcttgaccaactat
tctcggcgtatggacaccatggccaatatcctctactaccctcagaaaccgctgggcacc
actcggtctatggagttcttgaaattccgtgagctgccagccggacaaaacgccattgta
gcaattgcttgttactctggttataaccaagaagattccgtcattatgaaccagagtagt
attgacagaggtctcttccgaagtcttttcttccgatcatattcagatcaggagaaaaag
gttggcttgaactacacggaagtgtttgagaagccattccaccaaaacacccttcgtatg
aagcacggcacatatgataagctggatgaagatggtatcgttgctcctggtgtccgagtg
tcaggtgaggatatcatcattggcaagacggcgccaatcgaccccgagacccaggatctt
ggaaccaggacgaccatgcaccagagacgcgatatctcaacgcctctgcgaagtaccgag
aacggtatcgttgaccaggtcatcgtcacggtgaacgcggacaatgttaagtatgtcaag
gtccgtgttcgaacgaccaagattccccagattggagacaagtttgcttctcgtcacggt
cagaagggcactattggtgttacttaccgacaggaggatatgcctttcacaagagaaggt
ctcactccagatatcattatcaacccccacgccattccgtctcgtatgacaattgctcac
ttgattgagtgtctcctcagtaaggtctctacgttggaaggtatggagggtgatgctact
cccttcacggatgtcacggtcgactcagtctctgagctcttgcgaaagcacggttaccag
tctcgaggtttcgagattatgtacaacggccatactggccgcaagctaagagcacaagtg
ttctttggaccaacatactaccagcgactccgtcacatggtggatgacaagatccatgcc
agagctcgcggtcctgtgcagatcatgacaagacagccggtggagggtcgtgctcgagat
ggtggtctccgattcggagaaatggaacgtgattgtatgattgcacacggtgcggcgtcc
ttcctcaaggagcgattgtttgaggtgtcggacgccttcagagttcacatttgcgagatt
tgtggactcatgacacccattgctaacttatccaaacaatcgttcgagtgccggccatgc
aagaacaagactaagattgcacagattcacattccttatgctgccaagctcttgttccaa
gagctccagtctatgaacattgcagctagaatgtatacaaaccgatctggtgcatctatc
cgatag

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