Trichoderma asperellum: 36618888
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Entry
36618888 CDS
T10296
Symbol
TrAFT101_002011
Name
(RefSeq) uncharacterized protein
KO
K10754
replication factor C subunit 1
Organism
tasp Trichoderma asperellum
Pathway
tasp03030
DNA replication
tasp03410
Base excision repair
tasp03420
Nucleotide excision repair
tasp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
36618888 (TrAFT101_002011)
03410 Base excision repair
36618888 (TrAFT101_002011)
03420 Nucleotide excision repair
36618888 (TrAFT101_002011)
03430 Mismatch repair
36618888 (TrAFT101_002011)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tasp03032
]
36618888 (TrAFT101_002011)
03400 DNA repair and recombination proteins [BR:
tasp03400
]
36618888 (TrAFT101_002011)
DNA replication proteins [BR:
tasp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
36618888 (TrAFT101_002011)
DNA repair and recombination proteins [BR:
tasp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
36618888 (TrAFT101_002011)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
AAA_16
AAA_18
AAA_30
AAA_14
AAA_33
AAA_5
AAA_28
RuvB_N
BRCT_2
NTPase_1
Motif
Other DBs
NCBI-GeneID:
36618888
NCBI-ProteinID:
XP_065982592
LinkDB
All DBs
Position
1:join(6378542..6378644,6378695..6378737,6378802..6378840,6378901..6381537,6381596..6381917)
Genome browser
AA seq
1047 aa
AA seq
DB search
MPDIRSFFTPKGGAAPPKPAAAKPEPPAAKGKRGKNRKVVEDSDDEAIEEKKPTPKPPAK
KRETEPKGVAISADDYFASSKDSKATKASQTPKKSATKSTVEVDVPVRSSPRKKPAATAA
APEEDEEGDIAPRSKRARTSYKPAPVRDDEDAYMEDGDEDADDIFAADAKGRSKRGNDEY
ETEESEDEVVPKSKARGRAAPPGKNSADKPTAKATPAGKKRKSPEQESDEEEEEVLPRKK
PAASKPRAPRAKKADEPEDEDIQNILNSVATVRAPTPPPKDPNAKFDWRKAAAGGGNAST
QPAQPTGELPEGEEECLSGLTFVFTGVLQTIGRDEGQALVKRYGGKVTGQPSSKTSFVVL
GDDAGPSKLAKIKANGIKTIDEHGLFDLIRKLPAFGGTGKGAQKAQEKKKAEEEKVKQQI
AEMEAEEKAKKLEAEKLAKKKAASQGSTSSAAAQPARAPDMLLTSKYAPTQLNQICGNKA
QVEKIQNWLRNWPKSKKYNFQRRGADGMGGERAIIISGPPGIGKTTAAHLAAKLEGYDVL
ESNASDTRSKKLVEAGVSDVMNNTSLLGFFAGDGKSVDNAKKKIVLIMDEVDGMSAGDRG
GVGALAKFCRKTEVPLILICNERRLPKMKPFDHAAFDVRFNRPTVDQVRSRIMTICHREG
LKLPPPVVDALIEGSNKDIRQIINMISTAKLDQSSMSFDQSKAMSKAWEKHVVLKPWDIC
QKMLGGGLFAPASKATLNDKIELYFNDHEFSFLMIQENYLRTKPMALGGKGYTGREATLK
ALELFDQAAESISDGDLVDRMIHGPQQHWSLMPTHAVFSTVRPASFIAGQLLGSNFTSWL
GNHSKAGKLGRYIREIHSHMRLKSSGDHTEVRQEYLPLMWSQTVDRLQKEGGEAVGEVID
LMDSYYLTREDFDAIQELGVGPMSDENVSIESKTKAAFTRTYNAMNHPLPFIKASNVLAP
KKLAKEAPDLEEAIEEADDAEVLESPDAEEDDEIDLKKDKYIKQPKVKKPSKKAVKAQTA
DDGDSEEAKPKGRSKAKPAAAKGKAKK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatattcgatccttcttcacgccaaagggtggtgcagcccccccgaagcccgcg
gccgccaaaccagagccaccagcggccaaaggcaagcgagggaagaaccggaaagttgtt
gaagatagcgatgatgaagctatagaagagaagaagcctacaccaaagcccccggcgaaa
aaacgagaaacagagcccaaaggtgtagccatatccgccgatgattatttcgcctcttct
aaagactctaaagcgaccaaagcatctcaaacacccaagaaaagtgccaccaaatccact
gtcgaagttgacgtccctgttcgatctagtccgcgaaagaaacccgcagcaacggcagct
gcaccagaagaagacgaggagggagacatagcccctcggtccaaaagagccaggacctcg
tataagccggctcccgttcgcgatgatgaggatgcatacatggaagatggcgacgaggat
gccgatgatatattcgctgctgacgctaagggccgcagcaagcgtggaaatgacgaatat
gaaacggaagaatctgaagacgaagttgtccccaaatctaaagcacgaggacgagctgct
ccccctggaaagaattctgcagacaaaccgacggccaaggccacacctgccggcaagaag
cgaaagtccccggaacaggaatcggacgaagaggaagaagaagtactacctcgaaagaaa
cctgcagcgagcaaaccacgcgcacctagagcgaagaaagcagacgaacctgaggatgag
gatatccagaacatcttaaacagcgtggctactgtaagagcgccaacaccaccacctaaa
gatcccaacgcgaaattcgattggagaaaggctgccgcgggcggcggtaatgcttccaca
caacccgcccaacctaccggagagcttccagaaggcgaggaagagtgtctcagtggattg
acttttgtcttcaccggcgtgttgcaaaccattggccgcgatgaaggccaggcactagtc
aagcgatatggtggtaaagttactggtcaacccagcagcaaaaccagcttcgttgttctc
ggagacgatgctgggcccagtaaattagccaagatcaaagcaaatggtatcaagaccatt
gatgagcatggccttttcgacctgattcgcaaacttccggcatttggtggtacaggcaag
ggcgcccagaaagcacaagaaaagaagaaggcagaggaagaaaaagtgaagcaacagatt
gcggaaatggaggcggaagagaaagcaaagaagctggaagcggagaaactagcgaagaag
aaggccgcgtctcaaggatcaacgagcagcgccgcggctcagcctgcacgagcacccgat
atgctcctcacttccaaatatgcgccgacacagctaaatcaaatatgtggcaacaaggcg
caggtggaaaagattcaaaactggcttcgaaactggccaaagtcaaagaagtataatttt
cagcggcgtggcgcggatggcatgggaggcgagcgtgccatcattatatctggtcctcct
ggtattggaaaaaccacagcggcgcatttggcggccaagctcgagggctacgatgttttg
gagagcaatgcgagtgacacacgaagcaagaagcttgtcgaagctggggtgagcgatgtt
atgaacaatacttcattgctgggattcttcgcaggagacggtaaatcagtggataacgct
aagaagaagattgtactcatcatggatgaagtcgacggcatgtcggctggtgatcgcgga
ggagttggcgccctggccaaattctgcaggaagacggaggtgccgttgatcctgatctgc
aacgagcgcaggttgccaaagatgaagcccttcgaccacgctgcgtttgatgtaagattc
aaccgtccgacggtcgaccaagtacgctcccgtatcatgacaatctgccaccgagaaggc
ctaaaactgccaccaccagttgtcgatgctctcattgaagggagcaataaggacatccgc
cagattatcaacatgatttccacagcgaaactcgaccagtcatcaatgagttttgatcaa
agcaaagccatgtctaaagcatgggaaaagcatgtcgtcctcaagccgtgggatatctgt
cagaagatgcttggcggcggactctttgctcctgcgagcaaagcaaccctcaatgacaag
attgagctctatttcaatgatcatgagttcagcttccttatgatccaggagaattacctc
cgcaccaaacccatggccctggggggtaagggatacaccggtcgagaagccactttaaaa
gcgcttgagctctttgatcaagctgcggagagtatcagtgatggtgacttggtggatcgt
atgatccacggaccgcagcagcactggagtctgatgcctacacatgctgtttttagcact
gtaagacctgccagtttcattgctggccagttgctgggatctaattttacctcgtggctt
ggaaaccacagcaaagctgggaagctgggtcgatatatccgagaaattcactctcacatg
cggctcaagtcatctggcgaccataccgaggttcgacaagagtatttacccctgatgtgg
tcccaaacagttgatcgactgcagaaagaaggtggtgaagccgtgggagaagtgattgat
ctgatggacagctactatctcactcgagaagactttgacgctattcaggagctcggagtt
ggccccatgagcgacgaaaatgtcagtatcgaatcgaagacgaaggctgcctttactcga
acatacaatgccatgaatcacccactaccattcatcaaagccagcaatgttttggctcca
aagaagctggctaaggaggctccagatttggaagaagctattgaagaggcagatgatgca
gaggtcctggagtcgccagatgccgaagaagatgacgaaattgatctcaaaaaggacaaa
tacatcaagcaaccaaaggttaagaagccctcaaagaaggctgtgaaagcccagaccgca
gatgacggtgacagtgaagaggccaagccaaaaggccgctccaaggccaagccagctgca
gcaaagggaaaagcaaagaaatga
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