Trichoderma asperellum: 36619256
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Entry
36619256 CDS
T10296
Symbol
TrAFT101_003024
Name
(RefSeq) uncharacterized protein
KO
K18716
nucleoporin NUP42
Organism
tasp Trichoderma asperellum
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
36619256 (TrAFT101_003024)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
36619256 (TrAFT101_003024)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
Motif
Other DBs
NCBI-GeneID:
36619256
NCBI-ProteinID:
XP_024764151
LinkDB
All DBs
Position
2:complement(join(2144658..2146031,2146111..2146304,2146363..2146473,2146614..2146659))
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AA seq
574 aa
AA seq
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MALCRFFQQGYCKFGNSCRYEHANAGGNRNQPSSNRFGSLGGNNTSGADAALSKYNISAD
VIEKDLTTEAPQWILSAYAPGRDAPDQLFGGYPREQSFEELRLHYMVGKASGNEQQALNE
AQQLYQNAKQQMDNAARNPNEAAQFIVGGENRHPNRHDICREGTQGAPFGEFLVGKRPNP
AANAFGGNTSMTTTTSAFGQPSALGQPSNPFGQPSQSTFGQPSQPTSAFGQPTQATSTFG
QPSQPTSAFGQPSMLGAKPSPFGAPAFGQASQPNTQSNPFGQSQPQQTQASAFGQPSQLG
QKPNPFGSSTSAAPSAFSSAGNNAAPAANLFGGSSISQGGTPSSPFGSTTASQPNNASNP
FGQSTASTAFGQPSAPAANPFGAAPQGPASNAANPFGQQTSQQQSPFGAPTNQSSGTSFG
QNNANSFGNQQPGANPFGQAQTNGAPSQPNPFGANQQPQAAAGGNNPYPPSSSRQHPPID
SYSSKSMDGRLAQFKGKPVTYKDGQPGIQEFNGTWTRIWFPNGPPGYNRDTELSLEEYSD
AAKTQWNKFAQTGAFADGLMPELPPPRVCTRWDF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcgctatgcagattcttccagcagggctactgcaagttcggcaatagctgccgttat
gaacacgcaaatgctggtggcaaccgtaaccagccctcctccaaccgctttggatctctc
ggaggaaacaacaccagcggagccgatgccgccctatcaaaatataacatatcagccgat
gtcattgagaaggacttgacgaccgaagcgccgcaatggatcctctcggcctacgccccg
gggcgagacgctccagaccagctctttggaggataccctcgagaacagagttttgaagaa
ctcaggctccattacatggtcggaaaagcatcagggaatgagcagcaagctttgaacgaa
gcgcaacaactatatcaaaatgcgaagcagcaaatggataatgcggcgcgaaatccgaac
gaggcggcacaattcatcgtcggcggagaaaaccgacatccgaatagacatgacatatgc
agggaagggacacaaggtgcgccgtttggagaatttttggtgggaaagagaccgaaccca
gctgcaaacgcatttgggggaaacacttctatgacgacgaccacaagtgcttttggacag
ccgtctgccctgggacagccgtctaacccgtttggccagccctcgcaatctacattcggt
cagccatctcagcccacatcggcattcggacaaccgacccaagcaacttcgacctttggt
caaccatcccagccaacatcagcctttggccagccgtctatgcttggggctaagcctagc
ccgtttggtgccccagcgtttggtcaagcatctcagccaaacactcagagcaatccattt
ggtcagtcacaaccgcagcagactcaagcaagtgctttcggccagcctagtcaacttggc
cagaagccgaatccattcgggtcttcaacgagcgcggcaccgagtgctttttcatcagcg
ggcaacaacgctgcgccagctgccaacctttttggtggctcaagtatcagccaaggcggt
actccatcaagtccctttggatcaaccactgcgagccagcctaacaacgcctcaaacccc
tttggccagtcgacagcttcaactgcctttggacaaccatctgctcctgccgctaatcca
tttggagccgcaccacaagggccagcctcaaatgctgccaatccgtttggccaacagact
tcccagcagcaatcaccatttggggcaccgacgaaccagagttctggaacgagctttggg
cagaacaatgcaaactcgtttggaaaccaacagcctggtgcaaatccatttggccaggct
cagacaaatggtgccccttctcaacccaatcccttcggtgcgaatcagcagccccaagca
gccgcaggtggcaacaacccttacccaccgagtagctcaagacaacatccacctattgat
agctacagctcaaagtcaatggatggacggcttgctcaattcaaagggaagcctgtgact
tacaaagatgggcagcctggtatccaggaattcaatggtacctggacgcggatatggttt
cccaacggccctccaggatataatagggatactgagctgtccctggaagaatacagcgat
gcagcaaagacgcaatggaataaatttgcacagacgggggcatttgccgatgggctaatg
ccagagctcccaccaccaagagtatgcacacgctgggatttttaa
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