Trichoderma asperellum: 36619296
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Entry
36619296 CDS
T10296
Symbol
FAL1, TrAFT101_008434
Name
(RefSeq) RNA helicase
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tasp Trichoderma asperellum
Pathway
tasp03013
Nucleocytoplasmic transport
tasp03015
mRNA surveillance pathway
tasp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
36619296 (FAL1)
09122 Translation
03013 Nucleocytoplasmic transport
36619296 (FAL1)
03015 mRNA surveillance pathway
36619296 (FAL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
36619296 (FAL1)
03041 Spliceosome [BR:
tasp03041
]
36619296 (FAL1)
03009 Ribosome biogenesis [BR:
tasp03009
]
36619296 (FAL1)
03012 Translation factors [BR:
tasp03012
]
36619296 (FAL1)
Enzymes [BR:
tasp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
36619296 (FAL1)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
36619296 (FAL1)
mRNA cycle factors
Stress granule specific factors
36619296 (FAL1)
Spliceosome [BR:
tasp03041
]
Complex C
Other components
EJC/TREX
36619296 (FAL1)
Ribosome biogenesis [BR:
tasp03009
]
Eukaryotic type
90S particles
Helicases
36619296 (FAL1)
Translation factors [BR:
tasp03012
]
Eukaryotic type
Initiation factors
eIF-4
36619296 (FAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Gp6_2nd
COG4_N
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
36619296
NCBI-ProteinID:
XP_024762150
LinkDB
All DBs
Position
5:complement(join(846361..846419,846474..847514,847617..847725))
Genome browser
AA seq
402 aa
AA seq
DB search
MAEGAGGIDRKADERMEFSTSKEVTVHPTFEAMSLKENLLRGIYAYGYESPSAVQSRAIV
QICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALG
DYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLILDEAD
ELLNKGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEG
LKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGD
MPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGR
FGRKGVAINFVTTEDVRILRDIELYYSTQIDEMPMNVADLIA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggcgctggaggaattgaccgcaaggcggatgagaggatggaattctccacc
tccaaagaagtgacggtgcatccgacctttgaagcaatgtcgctgaaagagaaccttctt
cgcggcatttacgcttacggctacgaatcaccatccgccgttcagtcgcgagccattgtc
cagatctgcaagggacgcgacacaatcgcacaggcccagtctggtaccggcaaaacggcc
accttctcgattagcatgctgcaagttattgacacggccgtgcgcgagactcaagccctt
gttctgtcccccactcgagaattggccacccagatccaatcggtcgtcatggctctgggc
gattacatgaatgtgcaatgccacgcctgtatcggaggcaccaacgttggagaggatatt
cgaaagctggattacggccagcacattgtatcaggcacacctggacgagttgcggatatg
attcgacgacgccatcttagaacgaggcacatcaagatgttgatcctggatgaagcagac
gagctccttaacaagggattccgagagcaaatttatgatgtctaccgttatctaccacca
gcgactcaggttgtggtcgtcagtgccaccctcccctacgatgtcctcgacatgaccacc
aagttcatgaccgaccccgtccgaattctcgtcaagcgagacgaacttacgcttgaaggt
ttgaagcaatattttatcgctgtggagaaggaagactggaaattcgatacgctgtgtgat
ctttacgatacgctcaccattacccaagccgtcatcttctgcaacactcgccggaaggtc
gactggctcacggacaagatgcgcgaggcaaactttactgttagctccatgcatggtgat
atgcctcaaaaggagcgtgatagcatcatgcaagatttcagacagggtaacagccgagtg
ctcatctcgacagatgtctgggcacgtggtatcgacgttcagcaagtcagtctagttatc
aactacgacttgcctagtaaccgagagaactatatccaccgaattggccgtagcggacgg
tttggtcgcaagggtgtagccatcaactttgtgacgacagaggacgtacgcatcctccga
gacattgagttgtactactcaactcaaattgacgagatgccgatgaacgtcgcagatctc
attgcgtaa
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