Trichoderma asperellum: 36619414
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Entry
36619414 CDS
T10296
Symbol
TrAFT101_007364
Name
(RefSeq) uncharacterized protein
KO
K14315
nucleoporin NDC1
Organism
tasp Trichoderma asperellum
Pathway
tasp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
36619414 (TrAFT101_007364)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
36619414 (TrAFT101_007364)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
36619414 (TrAFT101_007364)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
36619414
NCBI-ProteinID:
XP_024756441
LinkDB
All DBs
Position
4:join(2903822..2903960,2904033..2904862,2904932..2905963)
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AA seq
666 aa
AA seq
DB search
MAGTPTRRAPYKDTLQPALHRRFSSTASLLLAVSYIEAILLGSWDSYFWSWFPLGPVGFR
TLLVFSCGLAILILRIASYHVGIKTTGSGLQTLASSLTALRTYETAFWYGVSSLLYCTIY
LGTKDEETNLQWINYLSGDRARLNERPLFLTCYMFTFALVQTVEHYRRDIDRLDLGSLER
KQAAEQKSLGFVSGSLQTLLLELPLALAECTKVALLTLPATVIIYYFFLRSFAWSWAMMF
LRPFYNMPRSNMLPSSWPLDIYLINRCILAGVGLGFLWAAGNRAFSVFMVKKPLKNDNPL
TSDSKDPNGSLLNGLKSKKLSIKAFAMWELALTAESCEARRRNIFNDIDRKDGPMWSQLY
SICMETLKSVEEHVDAYGKPAPQAAPEAEATEEKHRSSAPLREDPIFTSQSRQTNLRTGL
EQALERLARKPGSTPASELSPIARKTWQSAKDRVLSKEQQEAVSPDHLKDQAWQFATGLM
SIGWIGDLIRHDFRTQFTAAVLGGPYAEPTLPANAAIALCQLAVHSLAEDSYGNVHRDVP
SIIRTLTAIIKKVEGLKAQFPLHWTDYNGLKECPEVDELLEKMKTGLEQVVSKFEPYSTD
LRLTLTDLRFAKEAIGKPEAKKEKAKELKMVRPKGVAFETRASDDWAQRKAALRREFRRP
EMEQVR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcacaccgacgcggagagccccttataaggacactctgcagcctgctttgcat
cgacgcttctcctcaacagctagcctgttgttggccgtgtcatacatcgaagcgattctt
ttgggcagctgggactcctatttctggtcttggttccctctcggccccgtgggctttcga
acgttactagtcttctcttgtggcctcgccatcctcatcctccgaattgcgagctaccat
gtcggcatcaaaaccacgggatctgggctgcaaacattagcgtcttcactcaccgccctc
agaacatacgagacggcattctggtatggtgtttcgagcctgctctattgcaccatctac
ctgggaacgaaggacgaagagacgaacctccaatggatcaattatctcagcggggatcgt
gccaggctaaacgagcggccactcttcctgacctgctacatgtttactttcgccctggtt
cagaccgttgaacattacagacgtgatattgaccgtctggatcttggttcgctagagaga
aagcaggcggctgagcaaaagagcttgggtttcgtgtcgggctcccttcaaactctctta
ttggagctgcccttggctctggccgagtgcaccaaagtagctctcttgaccttgcccgcg
acagtcatcatatactatttcttcctaagatcgtttgcctggtcatgggccatgatgttc
ctgcggccattctacaacatgcccaggtccaacatgcttccgtcttcctggccgctggat
atttacctcatcaaccgatgcattctagcaggagtcggccttggctttttgtgggcggca
ggtaaccgggctttctcggtcttcatggttaagaagcctctgaagaacgataatccccta
acatctgactctaaggatcccaacggcagtcttctgaatggtctcaaaagcaagaagctc
tctatcaaggcctttgccatgtgggagttggccctcactgccgaaagctgcgaggcacga
aggcggaatattttcaacgacatagaccgcaaggatgggcccatgtggtctcagctgtac
tcaatctgcatggaaactttgaaaagtgtcgaggagcatgttgatgcttatggaaagccg
gcgccacaagccgcccctgaggctgaagcaactgaagaaaagcaccgttcatcggctccc
ttgagagaagaccccatattcacaagccaatccaggcaaaccaacctgcgaaccggtctt
gaacaggctctagagagacttgcgcgaaagcctggttcaactcccgcttcggagcttagc
cccatcgctcgcaaaacgtggcagagcgccaaagaccgagtgctaagcaaagaacaacaa
gaagcggtctctcccgatcatttgaaggatcaagcgtggcaattcgctactggtttgatg
tcaattggatggattggcgatctaatccgacatgattttcgtacacaatttactgctgca
gtcttgggaggtccctatgctgagcctacattgcccgccaacgcagccatcgctctctgc
caactggctgtgcacagtttggcggaagactcgtatggcaacgttcacagagatgtccca
agcatcatccggactttaacagcaatcatcaagaaggtggaaggattgaaagcccaattc
cctctgcactggaccgactacaacgggctaaaggaatgccctgaggtggacgaactactg
gagaagatgaagactggcttggagcaagtcgtttccaagtttgaaccttacagcaccgac
ctgaggcttacactcacggacctgcggtttgcaaaagaagccattggcaagccagaggcg
aagaaggaaaaggcaaaagagttgaaaatggtcagacctaaaggagtggcctttgaaacg
agagccagcgacgactgggcgcagaggaaagcagcactacgacgagagttcaggcggcca
gagatggaacaagtccgataa
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