Trichoderma asperellum: 90966255
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Entry
90966255 CDS
T10296
Symbol
PAB1_1, TrAFT101_002647
Name
(RefSeq) Protein phosphatase PP2A regulatory subunit B
KO
K13126
polyadenylate-binding protein
Organism
tasp Trichoderma asperellum
Pathway
tasp03015
mRNA surveillance pathway
tasp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tasp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
90966255 (PAB1_1)
09123 Folding, sorting and degradation
03018 RNA degradation
90966255 (PAB1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasp03019
]
90966255 (PAB1_1)
03041 Spliceosome [BR:
tasp03041
]
90966255 (PAB1_1)
Messenger RNA biogenesis [BR:
tasp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
90966255 (PAB1_1)
mRNA cycle factors
Stress granule specific factors
90966255 (PAB1_1)
Spliceosome [BR:
tasp03041
]
Complex C
Other components
Complex C specific factors
90966255 (PAB1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_5
RBD_DEAH11
RRM_RdRP1_2
YflT
Motif
Other DBs
NCBI-GeneID:
90966255
NCBI-ProteinID:
XP_065982764
LinkDB
All DBs
Position
2:1014782..1016806
Genome browser
AA seq
674 aa
AA seq
DB search
MAANTTSGAVDQLANELNNTSLNGSGDVKAPAVDTGVSAGAEDASAPTPTAAPHPQNSAS
LYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEEL
NYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQ
DETGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANFT
NVYVKNISADVTDNEFRELFEKYGDVTSSSLARDQEGKSRGFGFVNFTTHEAAFKAVEEL
NGKDFRGQELYVGRAQKKHEREEELRKSYEAARLEKASKYQGVNLYIKNLDDDVDDEKLR
QMFAEFGPITSAKVMRDTPQEGEEEVKDQEKDKENKKESENEAESAESAEKKAEKKVDKK
LGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVALAQRKDVRKSQLEASIQARNEL
RMRQAAAAAGMPQQYMQPPVFYAPGQQPGFIPQGGRGMPFPQPGMPLPQGGRPGQFPGYP
QQGGRNVPQGIPPNMYGLPGQFPPQFGQPGTPQFMAAMQQAQQAALAGGRGGAPQGGRGN
VAGMPPNVQGGMPGYPPTTARVWDVTTTLAATATSTTRLLATTLPMPTPPTLPLCSSLNL
LRLSLPSRSRFLVN
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaacaccacctcgggcgctgttgaccagctcgccaacgaactcaacaacaca
tccctcaatggcagcggcgatgtcaaggctcctgccgtggacactggtgtgagcgctggt
gctgaggacgcctctgctcctacccccactgccgccccccacccccagaactctgcctcg
ctctacgtcggagagctcgacccctccgtcaccgaggccatgctcttcgagctcttctcc
cagattggtgccgtggcttccatccgtgtctgccgtgacgctgtcactcgccgctctctg
ggttatgcctacgtcaactacaactctacccctgatggcgagaaggctctggaggagctc
aactacactctgatcaagggccgtccttgccgtatcatgtggtctcagcgcgaccctgct
ctgcgcaagaccggccagggcaacgtgttcatcaagaacttggacgttgctattgataac
aaggctctccacgacacctttgctgcctttggcaacattctcagctgcaaggttgcccag
gatgaaaccggcgcctccaagggttacggtttcgttcactacgagactgatgaggctgct
gctcaggccatcaagcacgtcaacggcatgctgctcaacgagaagaaggtttacgtcggc
taccacatccccaagaaggaccgccagagcaagtttgaggagatgaaggccaacttcacc
aacgtctacgtgaagaacatcagcgctgacgtgaccgataatgagttccgtgagctgttt
gagaagtacggtgatgtcacctcatcttctctggcccgtgatcaggagggcaagtctcgt
ggattcggatttgttaacttcaccactcacgaggctgctttcaaggctgtcgaggagctg
aacggaaaggatttccgtggccaggagctctacgttggccgtgcccagaagaagcatgag
cgtgaagaggagctgcgaaagtcttatgaggctgcgcgccttgagaaggccagcaagtac
cagggcgtcaacctgtacatcaagaaccttgatgatgacgttgatgacgagaagcttcgc
cagatgttcgccgaatttggccccatcacttctgccaaggtcatgagagacacccctcag
gagggcgaggaggaggtcaaggaccaggagaaggacaaggaaaacaagaaggagtccgag
aacgaggccgaatcggccgaaagcgccgagaagaaggctgagaagaaggttgacaagaag
cttggtaagagcaagggtttcggtttcgtctgctttagcaaccctgatgatgccaccaag
gctgttgccgagatgaaccagcgaatgatcaacaacaagcctctctatgttgctcttgcc
cagcgcaaggatgttcgtaagagccagcttgaggccagcatccaggctcgcaacgaactg
cgaatgcggcaggccgccgcggcagctggtatgccgcagcagtacatgcagccccccgtt
ttctatgctcctggccagcagccaggcttcatcccccagggtggtcgtggcatgcctttc
ccccagcctggaatgcctcttcctcagggtggccgtcctggccagttccccggataccct
cagcagggtggccgtaacgttcctcagggtatcccccccaacatgtacggcctccctggc
cagttccctcctcagtttggccagcctggaactcctcagttcatggctgctatgcagcag
gctcagcaggctgctcttgctggcggccgtggaggcgctcctcagggtggccgtggcaac
gtcgccggcatgccccccaacgttcagggcggaatgcccggctaccccccaacaaccgcc
agggtatgggacgtaacaacaacgctggccgcaacggcaacttcaacaaccaggctcctc
gcgacaacgctgccaatgccaacgccgccaacgctccctctatgctccagtctcaacttg
ctgcggctcagcctgcccagcagaagcagattcttggtgaactga
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