Taylorella asinigenitalis 14/45: KUM_0647
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Entry
KUM_0647 CDS
T02603
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tat
Taylorella asinigenitalis 14/45
Pathway
tat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUM_0647 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tat03019
]
KUM_0647 (rhlE)
Enzymes [BR:
tat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KUM_0647 (rhlE)
Messenger RNA biogenesis [BR:
tat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KUM_0647 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Utp25_C
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCG19443
UniProt:
I7IKQ7
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All DBs
Position
688421..689755
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AA seq
444 aa
AA seq
DB search
MDKKEFKEFGFHSKILENISNTGYLHATPIQALSFPPILEGRDVMGAAQTGTGKTAAFTL
PLLNRMIPKASFSTSPAKHPVRMLVLTPTRELAEQISKNVIAYADGLPLRTSLIYGGVDF
NAQKLELMRGADIVIATPGRLLDHVEQRTINLNQVEFLILDEADRMLDMGFMPDLLKILA
QLPSRRQSLLYSATFSDNIRSLAQKFLHDPVEITVASNNSTASTITQEIFSVSEAEKNAA
LLYLLASRNFNNVIIFSNRKITCKNLERYLNNLDLSAQSLHGDKTQSERTKALNLFKSAK
CNILVATDVAARGLDISDVDAVINYELPPTSEDYVHRIGRTGRAGRKGIAISMYSSDEEE
SLHEIETLIGTKFRSTKLSIPDMFKINFSSNKRGNLQSIKEEFNKNKFFYQPYVEEEAPL
STQEFNSKKPKFYNKNVPALLRRK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaagaatttaaagaatttggatttcactcaaaaatcctagaaaacatttca
aatacaggctatctgcatgccaccccgatacaggccttatcatttccaccaatattagaa
gggcgtgatgtgatgggtgctgcacagacagggacagggaagacagcggcatttacattg
ccacttttaaatagaatgatcccaaaggcaagcttcagcacatctcccgctaagcatcca
gtacgcatgcttgtactgacaccgacgcgagagttagctgagcaaatttctaaaaatgtt
attgcatatgcagatggtttgccgctaagaacttctcttatttacggaggcgtggatttt
aatgcacaaaagcttgagcttatgcgaggtgctgatattgttatagccactcctggcagg
ctacttgatcatgttgagcagagaactattaatttgaatcaagttgaatttctgattttg
gatgaggctgataggatgttagatatgggttttatgcccgacctattaaagattcttgct
caacttccaagcagaaggcaaagtctattatattcagcgacatttagcgataacattcgc
tcgcttgctcaaaagtttttgcatgatccagttgagataacagttgcatcaaataattcg
acagcttctacgattacgcaagagatttttagtgtgagtgaagcggaaaaaaatgcagct
ctgctctatcttcttgcctcacgtaattttaataatgtaattattttctcaaacagaaaa
ataacctgtaaaaatcttgagcgatatttaaataatttagacttatcggctcaatctctt
catggagataaaacgcaaagcgagagaacaaaagctttgaatttatttaaaagtgcgaaa
tgcaatattctagtagctactgatgttgctgcacgtggacttgatattagtgatgtggat
gctgtgattaattatgagctcccaccgacatctgaagattatgtacaccgcataggaagg
acaggaagggctggaagaaagggcattgctatctcaatgtattcaagcgatgaggaagaa
agtttgcatgaaattgaaaccttgattggaacgaaatttcgaagtacaaaacttagcatt
cctgatatgtttaagataaatttctcaagtaacaaaaggggaaacttgcaatcaattaaa
gaggaatttaataaaaataaattcttctatcagccctatgtagaagaggaagctccttta
tcaacgcaagaatttaattccaaaaaacctaaattctataacaaaaatgtgccagcttta
ttaagaagaaagtaa
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